RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 HSPA7P48741 367 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 NUP107P57740 925 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 USP45Q70EL2 814 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 DTWD1Q8N5C7 304 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 TERB1Q8NA31 727 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 B4GALNT2Q8NHY0 566 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 ZNF420Q8TAQ5 688 aaPredicted RBP25.59■■□□□ 1.69
HLA-C-208ENST00000487245 PNPT1Q8TCS8 783 aaKnown RBP25.59■■□□□ 1.69
HLA-C-208ENST00000487245 LMLNQ96KR4 655 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 CPEB1Q9BZB8 566 aaKnown RBP25.59■■□□□ 1.69
HLA-C-208ENST00000487245 NSUN3Q9H649 340 aaKnown RBP25.59■■□□□ 1.69
HLA-C-208ENST00000487245 GORASP2Q9H8Y8 452 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 ZDHHC3Q9NYG2 299 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 WWOXQ9NZC7 414 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 OPTCQ9UBM4 332 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 SLC28A1O00337 649 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 DEAF1O75398 565 aaPredicted RBP25.58■■□□□ 1.69
HLA-C-208ENST00000487245 CLTBP09497 229 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 WDR5P61964 334 aaKnown RBP25.58■■□□□ 1.69
HLA-C-208ENST00000487245 ABRAXAS2Q15018 415 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 C18orf21Q32NC0 220 aaPredicted RBP25.58■■□□□ 1.69
HLA-C-208ENST00000487245 CRTC1Q6UUV9 634 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 GPR180Q86V85 440 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 CLDN19Q8N6F1 224 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 DCBLD1Q8N8Z6 715 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 OR52E4Q8NGH9 312 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 ISOC1Q96CN7 298 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 ECHDC3Q96DC8 303 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 SUV39H2Q9H5I1 410 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 NTN4Q9HB63 628 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 ELOVL2Q9NXB9 296 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 HS3ST2Q9Y278 367 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 AP3M1Q9Y2T2 418 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 POLR3HQ9Y535 204 aaPredicted RBP25.58■■□□□ 1.69
HLA-C-208ENST00000487245 CROCCQ5TZA2 2017 aa25.58■■□□□ 1.69
HLA-C-208ENST00000487245 A0A1W2PQ67 120 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 EIF3FO00303 357 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 UPK1AO00322 258 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RGS14O43566 566 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 PIK3CGP48736 1102 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 SELPLGQ14242 412 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CCNYL2Q5T2Q4 361 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 LILRA6Q6PI73 481 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 GLB1L3Q8NCI6 653 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 MAGEE2Q8TD90 523 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CCDC97Q96F63 343 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 ASIC4Q96FT7 647 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CNDP2Q96KP4 475 aaKnown RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 PPM1MQ96MI6 270 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RNF145Q96MT1 663 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 ZBTB18Q99592 522 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 SEPHS2Q99611 448 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 DOK1Q99704 481 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 PKD2L2Q9NZM6 624 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 HECAQ9UBI9 543 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 TSR3Q9UJK0 312 aaKnown RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 PCDHGA11Q9Y5H2 935 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 K7EPI3 171 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 KCNH1O95259 989 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 GUCA1CO95843 209 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 HPRP00739 348 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RPL10P27635 214 aaKnown RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CA8P35219 290 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RFTN2Q52LD8 501 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 FAM98BQ52LJ0 330 aaKnown RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RALGPS2Q86X27 583 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CLVS1Q8IUQ0 354 aaPredicted RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 ULK4Q96C45 1275 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 RHBDF1Q96CC6 855 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 VPS50Q96JG6 964 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 YME1L1Q96TA2 773 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 NTMT1Q9BV86 223 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 CEP44Q9C0F1 390 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 TRPS1Q9UHF7 1281 aa25.57■■□□□ 1.68
HLA-C-208ENST00000487245 EIF3LQ9Y262 564 aaKnown RBP25.57■■□□□ 1.68
HLA-C-208ENST00000487245 ANKRD12Q6UB98 2062 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 NPIPB15A6NHN6 443 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-208ENST00000487245 GRM6O15303 877 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 KATNA1O75449 491 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 SNAP29O95721 258 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 ALDH3A2P51648 485 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 EMP3P54852 163 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 C22orf39Q6P5X5 142 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 ZSWIM9Q86XI8 627 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 RPL10LQ96L21 214 aaKnown RBP25.56■■□□□ 1.68
HLA-C-208ENST00000487245 ZNF641Q96N77 438 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-208ENST00000487245 ZNF583Q96ND8 569 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 RDH12Q96NR8 316 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 TUBA1CQ9BQE3 449 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 CRISPLD2Q9H0B8 497 aa25.56■■□□□ 1.68
HLA-C-208ENST00000487245 RSL1D1O76021 490 aaKnown RBP25.55■■□□□ 1.68
HLA-C-208ENST00000487245 FGF18O76093 207 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 ARHGEF15O94989 841 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 POP4O95707 220 aaKnown RBP25.55■■□□□ 1.68
HLA-C-208ENST00000487245 EBLN1P0CF75 366 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 HLCSP50747 726 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 DAG1Q14118 895 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 PYCR3Q53H96 274 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 TBPL2Q6SJ96 375 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 TRIM46Q7Z4K8 759 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms