RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SEMG2Q02383 582 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 KCTD21Q4G0X4 260 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 CDKL4Q5MAI5 379 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 C22orf39Q6P5X5 142 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 DTWD1Q8N5C7 304 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 GLB1L3Q8NCI6 653 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 BPIFB1Q8TDL5 484 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 USP7Q93009 1102 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 ULK4Q96C45 1275 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 MCCC1Q96RQ3 725 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 SEPHS2Q99611 448 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 COPS8Q99627 209 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC29A3Q9BZD2 475 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 THEGQ9P2T0 379 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 ZNF639Q9UID6 485 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 EI24O14681 340 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 TULP3O75386 442 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 GNAO1P09471 354 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CLTBP09497 229 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 B4GALNT1Q00973 533 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 HMGCS1Q01581 520 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 PTSQ03393 145 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 PTGR1Q14914 329 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 IMPG1Q17R60 797 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 ATP13A5Q4VNC0 1218 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CACHD1Q5VU97 1274 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 TTC23LQ6PF05 361 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 MBOAT1Q6ZNC8 495 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 RIMKLAQ8IXN7 391 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 ALDH16A1Q8IZ83 802 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CMTM8Q8IZV2 173 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 AADATQ8N5Z0 425 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CHID1Q9BWS9 393 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 DPY30Q9C005 99 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 LRTM1Q9HBL6 345 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CD320Q9NPF0 282 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 TMEM39AQ9NV64 488 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 IGLV3-16A0A075B6K0 115 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 A0A1W2PRU2 124 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 EIF3FO00303 357 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 NRG2O14511 850 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 GJA1P17302 382 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 GGT1P19440 569 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 LHCGRP22888 699 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 HLA-FP30511 346 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 AKT1P31749 480 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CCR7P32248 378 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CA8P35219 290 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 PPM1AP35813 382 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 RGL4Q8IZJ4 473 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 LIX1Q8N485 282 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 TNIP2Q8NFZ5 429 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 MPP4Q96JB8 637 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 RNF145Q96MT1 663 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CPEB1Q9BZB8 566 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 ZBP1Q9H171 429 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 SMPD3Q9NY59 655 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 CEPT1Q9Y6K0 416 aa17.6■□□□□ 0.41
PDLIM7-207ENST00000486828 BNIP3LO60238 219 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 DFNA5O60443 496 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ARHGEF15O94989 841 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 BMP10O95393 424 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 IL6P05231 212 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ANXA6P08133 673 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 RPS9P46781 194 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 FAM174BQ3ZCQ3 159 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 SGO1Q5FBB7 561 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ZDHHC20Q5W0Z9 365 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 GTF2H4Q92759 462 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ZNF583Q96ND8 569 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 CCDC115Q96NT0 180 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 BDH2Q9BUT1 245 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC32A1Q9H598 525 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 VAPAQ9P0L0 249 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 V9GYQ6 96 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 PLXNB3Q9ULL4 1909 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 SEC22BO75396 215 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 CLDN9O95484 217 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 MT-ND1P03886 318 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 OR56A5P0C7T3 313 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 CALRP27797 417 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 GGT5P36269 586 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 RPIAP49247 311 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 MAPKAPK3Q16644 382 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 PLA2G4EQ3MJ16 856 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 TTC33Q6PID6 262 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 VPS50Q96JG6 964 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ZNF641Q96N77 438 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC46A2Q9BY10 475 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 SMG9Q9H0W8 520 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 CLMPQ9H6B4 373 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ZDHHC6Q9H6R6 413 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 C1orf109Q9NX04 203 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 ARL15Q9NXU5 204 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 TUBA8Q9NY65 449 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 PDE10AQ9Y233 779 aa17.59■□□□□ 0.41
PDLIM7-207ENST00000486828 TRIM64CA6NLI5 447 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms