RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FAM83CQ9BQN1 747 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 IL1RL2Q9HB29 575 aa19.92■□□□□ 0.78
HPS3-206ENST00000486530 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 DENND4AQ7Z401 1863 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 GRXCR2A6NFK2 248 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 NME4O00746 187 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 ITGB7P26010 798 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 SLC6A11P48066 632 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 KLC1Q07866 573 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 MAD2L1Q13257 205 aaPredicted RBP19.91■□□□□ 0.78
HPS3-206ENST00000486530 BLMHQ13867 455 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 NFYCQ13952 458 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 ADGRE1Q14246 886 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 GRIN2CQ14957 1233 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 ACOX1Q15067 660 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 HNRNPA1L2Q32P51 320 aaKnown RBP19.91■□□□□ 0.78
HPS3-206ENST00000486530 TMEM184AQ6ZMB5 413 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 ZFAND4Q86XD8 727 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 PLCD3Q8N3E9 789 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 TMIEQ8NEW7 156 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 PROKR1Q8TCW9 393 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 OR8D1Q8WZ84 308 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 GLYATL1Q969I3 302 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 AP2M1Q96CW1 435 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 LRCH3Q96II8 777 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 HBEGFQ99075 208 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 KLQ9UEF7 1012 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 RIMS3Q9UJD0 308 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 RNF11Q9Y3C5 154 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 CEP290O15078 2479 aa19.91■□□□□ 0.78
HPS3-206ENST00000486530 ZFC3H1O60293 1989 aaKnown RBP19.9■□□□□ 0.78
HPS3-206ENST00000486530 ASPDHA6ND91 283 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 HEPACAM2A8MVW5 462 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 LOC730098B7Z3J9 87 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 WNT9AO14904 365 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 ULK1O75385 1050 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 CLDN9O95484 217 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 HSD17B1P14061 328 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 RHDQ02161 417 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 CREB5Q02930 508 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 MESP2Q0VG99 397 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 PDGFRLQ15198 375 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 LRRC36Q1X8D7 754 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 CYP20A1Q6UW02 462 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 TRIM46Q7Z4K8 759 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 MCOLN3Q8TDD5 553 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 USP7Q93009 1102 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 VPS33AQ96AX1 596 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 SLC45A3Q96JT2 553 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 GDE1Q9NZC3 331 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 POLR3HQ9Y535 204 aaPredicted RBP19.9■□□□□ 0.78
HPS3-206ENST00000486530 IFRD1O00458 451 aaPredicted RBP19.9■□□□□ 0.78
HPS3-206ENST00000486530 MANBAO00462 879 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 FFAR3O14843 346 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 GPR42O15529 346 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 SLCO2B1O94956 709 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 SLC6A2P23975 617 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 SLC6A12P48065 614 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 BNIP2Q12982 314 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 GGTA1PQ4G0N0 100 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 IL23RQ5VWK5 629 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 SLC15A3Q8IY34 581 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 CATSPER1Q8NEC5 780 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 DUS3LQ96G46 650 aaKnown RBP19.9■□□□□ 0.78
HPS3-206ENST00000486530 TRPV4Q9HBA0 871 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 THG1LQ9NWX6 298 aaKnown RBP19.9■□□□□ 0.78
HPS3-206ENST00000486530 ITM2BQ9Y287 266 aa19.9■□□□□ 0.78
HPS3-206ENST00000486530 TCRBV3S1A0A5B6 114 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 OR2AG2A6NM03 316 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 LINC01565O15544 149 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 ATG13O75143 517 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 NPPAP01160 153 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 KRT6AP02538 564 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 KRT6BP04259 564 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 GSTM1P09488 218 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 G6PDP11413 515 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 EPORP19235 508 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 JAK1P23458 1154 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 IL12AP29459 219 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 KRT6CP48668 564 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 PRLHRP49683 370 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 MRPS35P82673 323 aaKnown RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 GSTM4Q03013 218 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 ELP6Q0PNE2 266 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 HYAL1Q12794 435 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 CAPRIN1Q14444 709 aaKnown RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 ELAVL3Q14576 367 aaKnown RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 TLR1Q15399 786 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 GRAMD1BQ3KR37 738 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 TIGD2Q4W5G0 525 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 SFT2D3Q587I9 215 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 C9orf64Q5T6V5 341 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 SYCE2Q6PIF2 218 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 GET4Q7L5D6 327 aaPredicted RBP19.89■□□□□ 0.77
HPS3-206ENST00000486530 CYP2U1Q7Z449 544 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 DHFR2Q86XF0 187 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 RASGRP3Q8IV61 690 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 PPP2R3CQ969Q6 453 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 DTD2Q96FN9 168 aa19.89■□□□□ 0.77
HPS3-206ENST00000486530 COQ10AQ96MF6 247 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms