RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 HIST1H2AJQ99878 128 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 RTKNQ9BST9 563 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 H2AFJQ9BTM1 129 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
NELFCD-209ENST00000486263 ALG9Q9H6U8 611 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
NELFCD-209ENST00000486263 WASH6PQ9NQA3 447 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 IMP3Q9NV31 184 aaKnown RBP13.56□□□□□ -0.24
NELFCD-209ENST00000486263 ZNF358Q9NW07 568 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 MKS1Q9NXB0 559 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 NKIRAS1Q9NYS0 192 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 COLEC10Q9Y6Z7 277 aa13.56□□□□□ -0.24
NELFCD-209ENST00000486263 TRBV23OR9-2A0A075B6M9 112 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SYCE1LA8MT33 242 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CDC7O00311 574 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SLC30A4O14863 429 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SLC16A5O15375 505 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 YY2O15391 372 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 KDM1AO60341 852 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TSPAN12O95859 305 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TOP3BO95985 862 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CREB1P16220 341 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TAC1P20366 129 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 NDUFS1P28331 727 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 EPHA8P29322 1005 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 DLG1Q12959 904 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SP140Q13342 867 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 RSPO4Q2I0M5 234 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 DEFB133Q30KQ1 61 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 N4BP2L1Q5TBK1 243 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CAPRIN2Q6IMN6 1127 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 C16orf46Q6P387 395 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 UNC5DQ6UXZ4 953 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 GPSM1Q86YR5 675 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 ANKRD42Q8N9B4 389 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 ASB11Q8WXH4 323 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 EXT2Q93063 718 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TCEAL3Q969E4 200 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 KIAA1191Q96A73 305 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 RMDN2Q96LZ7 410 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 MRPL57Q9BQC6 102 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 MRPL46Q9H2W6 279 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TRIT1Q9H3H1 467 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 STN1Q9H668 368 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CAAP1Q9H8G2 361 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 UCKL1Q9NWZ5 548 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CDV3Q9UKY7 258 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 PCOLCE2Q9UKZ9 415 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 WDR37Q9Y2I8 494 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 CFAP20Q9Y6A4 193 aaKnown RBP13.55□□□□□ -0.24
NELFCD-209ENST00000486263 PCNX2A6NKB5 2137 aa13.55□□□□□ -0.24
NELFCD-209ENST00000486263 KIR2DS5A0A0G2JLQ3 304 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 A0A0G2JNG1 304 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 PRR19A6NJB7 356 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 SUPT3HB4E1H0 165 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 KIR2DS3K7RE56 304 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 TM9SF1O15321 606 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 FFAR2O15552 330 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 PRPF4O43172 522 aaKnown RBP eCLIP13.54□□□□□ -0.244e-8■□□□□ 9.1
NELFCD-209ENST00000486263 SMIM24O75264 130 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 SUPT3HO75486 399 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 ZWINTO95229 277 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 MATN4O95460 622 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 VIPP01282 170 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 ENO2P09104 434 aaPredicted RBP13.54□□□□□ -0.24
NELFCD-209ENST00000486263 ACADLP28330 430 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 KIR2DS5Q14953 304 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 CLCA4Q14CN2 919 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 SF3A2Q15428 464 aaKnown RBP13.54□□□□□ -0.24
NELFCD-209ENST00000486263 RPE65Q16518 533 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
NELFCD-209ENST00000486263 IYDQ6PHW0 289 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 ERMP1Q7Z2K6 904 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 GATAD2AQ86YP4 633 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 TBC1D21Q8IYX1 336 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 MINDY1Q8N5J2 469 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 AVL9Q8NBF6 648 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 PHC3Q8NDX5 983 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 MAPK15Q8TD08 544 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 TCP10LQ8TDR4 215 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 EGFL8Q99944 293 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 DUSP23Q9BVJ7 150 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 MVB12BQ9H7P6 319 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 IL21RQ9HBE5 538 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 PARVBQ9HBI1 364 aa13.54□□□□□ -0.24
NELFCD-209ENST00000486263 CD274Q9NZQ7 290 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms