RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 EFCAB7A8K855 629 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 TRIM49D1C9J1S8 452 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 PSMD11O00231 422 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 VIMP08670 466 aaKnown RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 THRAP10827 490 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 LIFP15018 202 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 CREB1P16220 341 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ADRA1DP25100 572 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 SPRP35270 261 aaPredicted RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 UGT1A3P35503 534 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 CD86P42081 329 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 CCT5P48643 541 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 HNRNPH2P55795 449 aaKnown RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 NFATC2Q13469 925 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 MPP2Q14168 576 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 GALNT3Q14435 633 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ITIH4Q14624 930 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 QPCTQ16769 361 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 INSCQ1MX18 579 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 RALGPS1Q5JS13 557 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ANKS6Q68DC2 871 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ALG1LQ6GMV1 187 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 KDELC1Q6UW63 502 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ADAMTSL4Q6UY14 1074 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 SH2D5Q6ZV89 423 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 USP45Q70EL2 814 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 CHST15Q7LFX5 561 aaPredicted RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 PIGWQ7Z7B1 504 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 TAX1BP1Q86VP1 789 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 LMNTD2Q8IXW0 634 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 UNC5BQ8IZJ1 945 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 RAB3IL1Q8TBN0 382 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 TBC1D10AQ9BXI6 508 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 POLR1EQ9GZS1 481 aaKnown RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 APMAPQ9HDC9 416 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 SCHIP1Q9P0W5 487 aaPredicted RBP9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 ZFATQ9P243 1243 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 BOD1L1Q8NFC6 3051 aa9.22□□□□□ -0.93
TMEM39A-208ENST00000486159 C1orf232A0A0U1RR37 186 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ZCWPW2A0A1B0GU75 182 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 A0A1W2PQ67 120 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 HEATR9A2RTY3 570 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CXorf49A8MYA2 514 aaPredicted RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 COPEO14579 308 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 DUX1O43812 170 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SNX2O60749 519 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 GSTA1P08263 222 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 DHRS4L1P0CG22 281 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ACP5P13686 325 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 HLA-DPA1P20036 260 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 TEAD1P28347 426 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CRHR1P34998 444 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CA5AP35218 305 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 RPA3P35244 121 aaPredicted RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 MAPK9P45984 424 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SPINT3P49223 89 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 EPHB1P54762 984 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 WNT3AP56704 352 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 WDR4P57081 412 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 BIRC2Q13490 618 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 DENND5AQ6IQ26 1287 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 PACS1Q6VY07 963 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 LYSMD3Q7Z3D4 306 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 TIPARPQ7Z3E1 657 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM129CQ86XR2 697 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 PTRH1Q86Y79 214 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 C4orf33Q8N1A6 199 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 BMPERQ8N8U9 685 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CCDC197Q8NCU1 140 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 IPMKQ8NFU5 416 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 OR4D9Q8NGE8 314 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CALML6Q8TD86 181 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 MGARPQ8TDB4 240 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 LRRC8CQ8TDW0 803 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ISL2Q96A47 359 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF669Q96BR6 464 aaPredicted RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 MRRFQ96E11 262 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 MRGPRX2Q96LB1 330 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 TAAR9Q96RI9 348 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 FICDQ9BVA6 458 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC12A9Q9BXP2 914 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 PRDM8Q9NQV8 689 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SMYD2Q9NRG4 433 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 STARD5Q9NSY2 213 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC39A1Q9NY26 324 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC23A2Q9UGH3 650 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 KLHL3Q9UH77 587 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 DCDC2Q9UHG0 476 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 RIMKLBQ9ULI2 386 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 ITPR3Q14573 2671 aa9.21□□□□□ -0.94
TMEM39A-208ENST00000486159 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 LOC101059948A0A1B0GTJ6 334 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 LOC285095A0A1B0GVY8 99 aa9.2□□□□□ -0.94
TMEM39A-208ENST00000486159 A6NCN8 305 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms