RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 APOBEC3HQ6NTF7 200 aaKnown RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 ATF7IPQ6VMQ6 1270 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 RAD9BQ6WBX8 426 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 MAP7D3Q8IWC1 876 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 KLHDC9Q8NEP7 349 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 TRPV1Q8NER1 839 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 TMEM255BQ8WV15 326 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 SLC44A1Q8WWI5 657 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 DNAAF4Q8WXU2 420 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 LINGO1Q96FE5 620 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 SCRN2Q96FV2 425 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 MAP7D2Q96T17 732 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 CWC25Q9NXE8 425 aaPredicted RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 OR14J1Q9UGF5 321 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 POLG2Q9UHN1 485 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 GTF2A1LQ9UNN4 478 aa4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 TPRP12270 2363 aaKnown RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 RIF1Q5UIP0 2472 aaKnown RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 RPAP1Q9BWH6 1393 aaPredicted RBP4.36□□□□□ -1.71
SMARCC1-207ENST00000485833 PTPRZ1P23471 2315 aaPredicted RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 COL4A4P53420 1690 aaPredicted RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 GVINP1Q7Z2Y8 2422 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 PKD1L2Q7Z442 2459 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 SMCHD1A6NHR9 2005 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 IGLV5-45A0A087WSX0 123 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 A0A1W2PPH5 198 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 ANKRD28O15084 1053 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 EIF3DO15371 548 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 SYNGR3O43761 229 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 GM2AP17900 193 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 UGT1A1P22309 533 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 AHRP35869 848 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 FKBP1AP62942 108 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 CSTF3Q12996 717 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 SHROOM1Q2M3G4 852 aaPredicted RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 KRTCAP3Q53RY4 240 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 PAPD4Q6PIY7 484 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 C15orf52Q6ZUT6 534 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 R3HCC1LQ7Z5L2 792 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 CCDC191Q8NCU4 936 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 TDRD7Q8NHU6 1098 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 ARHGEF26Q96DR7 871 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 ST6GAL2Q96JF0 529 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 SIL1Q9H173 461 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 PORCNQ9H237 461 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 ZNF696Q9H7X3 374 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 STK39Q9UEW8 545 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 ZHX2Q9Y6X8 837 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
SMARCC1-207ENST00000485833 MYH13Q9UKX3 1938 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CHD8Q9HCK8 2581 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 A0A1W2PP11 408 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 C1orf226A1L170 272 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 EPOPA6NHQ4 379 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CXCL11O14625 94 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 JRKO75564 520 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 MYOGP15173 224 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 ZNF23P17027 643 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 NR1D1P20393 614 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CASP6P55212 293 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 COG7P83436 770 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 ZBED6P86452 979 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 PLEKHM3Q6ZWE6 761 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 WDSUB1Q8N9V3 476 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 FAM76AQ8TAV0 307 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 USP6NLQ92738 828 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CFAP53Q96M91 514 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 MAGIXQ9H6Y5 334 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 UPF2Q9HAU5 1272 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 MARCH4Q9P2E8 410 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 UBA2Q9UBT2 640 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 DBF4Q9UBU7 674 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CNOT8Q9UFF9 292 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 AGTPBP1Q9UPW5 1226 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 NUDCQ9Y266 331 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 LAS1LQ9Y4W2 734 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 CLIC4Q9Y696 253 aa4.34□□□□□ -1.71
SMARCC1-207ENST00000485833 TECTAO75443 2155 aa4.34□□□□□ -1.72
SMARCC1-207ENST00000485833 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 MAP1BP46821 2468 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 FAM186AA6NE01 2351 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 SPTBN2O15020 2390 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 PLXNA3P51805 1871 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 RFX7Q2KHR2 1363 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 OR5K3A6NET4 321 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 PMS2P5A8MQ11 134 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 SLC25A12O75746 678 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 IPO7O95373 1038 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 AGR2O95994 175 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 APOHP02749 345 aaPredicted RBP4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 INHBAP08476 426 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 SPARCP09486 303 aa4.33□□□□□ -1.72
SMARCC1-207ENST00000485833 BSGP35613 385 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms