RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KIR2DS5Q14953 304 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 TSNQ15631 228 aaKnown RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 C6orf132Q5T0Z8 1188 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 DUS1LQ6P1R4 473 aaKnown RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 UBE2R2Q712K3 238 aaPredicted RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 ISCA2Q86U28 154 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SFRP1Q8N474 314 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 PHC3Q8NDX5 983 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 PATE1Q8WXA2 126 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 PTERQ96BW5 349 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 APOPT1Q96IL0 206 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 FERD3LQ96RJ6 166 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 PHOX2BQ99453 314 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 EDEM2Q9BV94 578 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 DUSP23Q9BVJ7 150 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SLC12A9Q9BXP2 914 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SSU72Q9NP77 194 aaKnown RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SIRPGQ9P1W8 387 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 PCDHGB2Q9Y5G2 931 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 GPR179Q6PRD1 2367 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 TDRD6O60522 2096 aaKnown RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 MYO15AQ9UKN7 3530 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 HMGB1P1B2RPK0 211 aaPredicted RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 CDX4O14627 284 aaPredicted RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 NOBOXO60393 691 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SPAG7O75391 227 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 RPN2P04844 631 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SLC19A1P41440 591 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 KPNA2P52292 529 aaKnown RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SUZ12Q15022 739 aaKnown RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 OR4D1Q15615 310 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SBSNQ6UWP8 590 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 CDHR3Q6ZTQ4 885 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 ADAMTSL2Q86TH1 951 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 C17orf82Q86X59 251 aaPredicted RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 TBC1D21Q8IYX1 336 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 GPR156Q8NFN8 814 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 OR5AR1Q8NGP9 310 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 OR4C6Q8NH72 309 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 OR5K2Q8NHB8 316 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 STAG3L4Q8TBR4 150 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 MAPK15Q8TD08 544 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SLC37A2Q8TED4 501 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 DLG3Q92796 817 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 CXorf40BQ96DE9 158 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 TRIT1Q9H3H1 467 aaKnown RBP17.13■□□□□ 0.33
CHMP3-207ENST00000485465 ALG9Q9H6U8 611 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 MVB12BQ9H7P6 319 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 PARVBQ9HBI1 364 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 RXFP3Q9NSD7 469 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 TMEM216Q9P0N5 145 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 GRID1Q9ULK0 1009 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 COLEC10Q9Y6Z7 277 aa17.13■□□□□ 0.33
CHMP3-207ENST00000485465 KNL1Q8NG31 2342 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 PRAMEF33A0A0G2JMD5 474 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 ARHGEF33A8MVX0 844 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 TRIM38O00635 465 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 TYROBPO43914 113 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
CHMP3-207ENST00000485465 RBP1P09455 135 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 CYP2A7P20853 494 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 NDUFS1P28331 727 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 BDKRB1P46663 353 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 KCNC1P48547 511 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 UBE2IP63279 158 aaKnown RBP17.12■□□□□ 0.33
CHMP3-207ENST00000485465 KRT33BQ14525 404 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 AASDHQ4L235 1098 aaPredicted RBP17.12■□□□□ 0.33
CHMP3-207ENST00000485465 TECRLQ5HYJ1 363 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 N4BP2L1Q5TBK1 243 aaPredicted RBP17.12■□□□□ 0.33
CHMP3-207ENST00000485465 C16orf46Q6P387 395 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 DBX2Q6ZNG2 339 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 ASCL5Q7RTU5 278 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 SLC9B2Q86UD5 537 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 TRIM48Q8IWZ4 208 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 ARL14Q8N4G2 192 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 EID2Q8N6I1 236 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 KYQ8NBH2 561 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 FBXO15Q8NCQ5 510 aaPredicted RBP17.12■□□□□ 0.33
CHMP3-207ENST00000485465 RHEBL1Q8TAI7 183 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 TMEM9BQ9NQ34 198 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 CPNE7Q9UBL6 633 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 RAPGEFL1Q9UHV5 662 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 PDE10AQ9Y233 779 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
CHMP3-207ENST00000485465 KERAO60938 352 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 VIPP01282 170 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 ENO2P09104 434 aaPredicted RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 MAP4P27816 1152 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 MAZP56270 477 aaKnown RBP17.11■□□□□ 0.33
CHMP3-207ENST00000485465 PRKG2Q13237 762 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 SLC14A1Q13336 389 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 PHKG1Q16816 387 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 C14orf28Q4W4Y0 310 aa17.11■□□□□ 0.33
CHMP3-207ENST00000485465 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms