RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NAT9Q9BTE0 207 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ASPSCR1Q9BZE9 553 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 DPH1Q9BZG8 443 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 DPH5Q9H2P9 285 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 ZNF768Q9H5H4 540 aaKnown RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 XKR8Q9H6D3 395 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 IARS2Q9NSE4 1012 aaKnown RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 INTS10Q9NVR2 710 aaKnown RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 POLG2Q9UHN1 485 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 TSR3Q9UJK0 312 aaKnown RBP18.61■□□□□ 0.57
SNX17-206ENST00000484886 CHMP2BQ9UQN3 213 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 B3GALT1Q9Y5Z6 326 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 FAM169AQ9Y6X4 670 aa18.61■□□□□ 0.57
SNX17-206ENST00000484886 FAM187AA6NFU0 413 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 TLCD2A6NGC4 264 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 RAD51CO43502 376 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 KDM1AO60341 852 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 NIPSNAP2O75323 286 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 URI1O94763 535 aaPredicted RBP18.6■□□□□ 0.57
SNX17-206ENST00000484886 RPN2P04844 631 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 ACADLP28330 430 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 MC2RQ01718 297 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 CKAP4Q07065 602 aaKnown RBP18.6■□□□□ 0.57
SNX17-206ENST00000484886 CALCOCO2Q13137 446 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 HSP90AA5PQ58FG0 334 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 SPANXN3Q5MJ09 141 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 CEACAM20Q6UY09 585 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 AMIGO1Q86WK6 493 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 LMNTD2Q8IXW0 634 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 TBC1D21Q8IYX1 336 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 UNC5BQ8IZJ1 945 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 BBOF1Q8ND07 529 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 UBXN4Q92575 508 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 BIRC8Q96P09 236 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 CD180Q99467 661 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 MAP3K3Q99759 626 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 DDA1Q9BW61 102 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 TFB2MQ9H5Q4 396 aaKnown RBP18.6■□□□□ 0.57
SNX17-206ENST00000484886 PPANQ9NQ55 473 aaKnown RBP18.6■□□□□ 0.57
SNX17-206ENST00000484886 ZC3H7BQ9UGR2 993 aaKnown RBP18.6■□□□□ 0.57
SNX17-206ENST00000484886 PCDHB11Q9Y5F2 797 aa18.6■□□□□ 0.57
SNX17-206ENST00000484886 POLR1CO15160 346 aaPredicted RBP18.59■□□□□ 0.57
SNX17-206ENST00000484886 GPC4O75487 556 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 S1PR4O95977 384 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 ERVK-10P10266 1014 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 PKMP14618 531 aaKnown RBP18.59■□□□□ 0.57
SNX17-206ENST00000484886 CDH3P22223 829 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 CD82P27701 267 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 ELK3P41970 407 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 TLE3Q04726 772 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 ZNF789Q5FWF6 425 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 IGDCC3Q8IVU1 814 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 BMPERQ8N8U9 685 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 SIDT2Q8NBJ9 832 aaKnown RBP18.59■□□□□ 0.57
SNX17-206ENST00000484886 OR5K2Q8NHB8 316 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 TEFMQ96QE5 360 aaKnown RBP18.59■□□□□ 0.57
SNX17-206ENST00000484886 NRTNQ99748 197 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 B3GNT4Q9C0J1 378 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 FBXO5Q9UKT4 447 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 PLAGL1Q9UM63 463 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 CDYLQ9Y232 598 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 PCDHGA3Q9Y5H0 932 aa18.59■□□□□ 0.57
SNX17-206ENST00000484886 IGHV5-51A0A0C4DH38 117 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 STMND1H3BQB6 276 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 MATN2O00339 956 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 BTN3A3O00478 584 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 BTN3A1O00481 513 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 LIPCP11150 499 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 SHMT2P34897 504 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 KPNA2P52292 529 aaKnown RBP18.58■□□□□ 0.56
SNX17-206ENST00000484886 ADARP55265 1226 aaKnown RBP18.58■□□□□ 0.56
SNX17-206ENST00000484886 SH3BP2P78314 561 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 MPP1Q00013 466 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 PDIA2Q13087 525 aaKnown RBP18.58■□□□□ 0.56
SNX17-206ENST00000484886 CLN3Q13286 438 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 PLEKHS1Q5SXH7 462 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ANKMY2Q8IV38 441 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ZBTB2Q8N680 514 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 KLHL6Q8WZ60 621 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ELMO2Q96JJ3 720 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 FOPNLQ96NB1 174 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 OR6C1Q96RD1 312 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ERP44Q9BS26 406 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 APMAPQ9HDC9 416 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 FBXO8Q9NRD0 319 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 SOHLH2Q9NX45 425 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 CDC23Q9UJX2 597 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ACSL6Q9UKU0 697 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 LHX6Q9UPM6 363 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 ICKQ9UPZ9 632 aa18.58■□□□□ 0.56
SNX17-206ENST00000484886 UTP11Q9Y3A2 253 aaKnown RBP18.58■□□□□ 0.56
SNX17-206ENST00000484886 C2orf74A8MZ97 194 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 SLCO2B1O94956 709 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 NELFEP18615 380 aaKnown RBP18.57■□□□□ 0.56
SNX17-206ENST00000484886 TGIF1Q15583 401 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 TTC23LQ6PF05 361 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 UNC5DQ6UXZ4 953 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 LRRC39Q96DD0 335 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 CRELD1Q96HD1 420 aa18.57■□□□□ 0.56
SNX17-206ENST00000484886 ZPBPQ9BS86 351 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms