RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.01□□□□□ -0.49
PABPC4-215ENST00000484555 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
PABPC4-215ENST00000484555 FERD3LQ96RJ6 166 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 SLX1AQ9BQ83 275 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 OR52A5Q9H2C5 316 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 FAM60AQ9NP50 221 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 NENFQ9UMX5 172 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 C2CD3Q4AC94 2353 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 NUP210LQ5VU65 1888 aa12.01□□□□□ -0.49
PABPC4-215ENST00000484555 MDC1Q14676 2089 aaKnown RBP12.01□□□□□ -0.49
PABPC4-215ENST00000484555 BUD23O43709 281 aaKnown RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 PRAMEF1O95521 474 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 ONECUT2O95948 504 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 MMP11P24347 488 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 CHRNA4P43681 627 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 PRLHRP49683 370 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 NR1I3Q14994 352 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 PRKD1Q15139 912 aaPredicted RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 KRTAP21-3Q3LHN1 58 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 NKAIN1Q4KMZ8 207 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 ZNF658BQ4V348 819 aaPredicted RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 C1orf189Q5VU69 101 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 AGAP7PQ5VUJ5 663 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 PRAMEF13Q5VWM6 474 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 SPESP1Q6UW49 350 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 NPNTQ6UXI9 565 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 GDF7Q7Z4P5 450 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 ZC3H18Q86VM9 953 aaKnown RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 FJX1Q86VR8 437 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 C19orf47Q8N9M1 422 aaKnown RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 OR52E1Q8NGJ3 308 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 BLOC1S5Q8TDH9 187 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 N4BP2L2Q92802 583 aaPredicted RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 AGAP4Q96P64 663 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 FCRL5Q96RD9 977 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 MAK16Q9BXY0 300 aaKnown RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 SPRTNQ9H040 489 aaPredicted RBP12□□□□□ -0.49
PABPC4-215ENST00000484555 KLHL25Q9H0H3 589 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 SLC6A20Q9NP91 592 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 CTTNBP2NLQ9P2B4 639 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 CDYLQ9Y232 598 aa12□□□□□ -0.49
PABPC4-215ENST00000484555 LRRD1A4D1F6 860 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 STX7O15400 261 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 HCRTR1O43613 425 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 SRP72O76094 671 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 H2AFZP0C0S5 128 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 NFKB1P19838 968 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 TNNT3P45378 269 aaPredicted RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 CDC16Q13042 620 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 RPA4Q13156 261 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 BOP1Q14137 746 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 TLR1Q15399 786 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 ZNF324BQ6AW86 544 aaPredicted RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 H2AFVQ71UI9 128 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 BZW1Q7L1Q6 419 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 TMEM151BQ8IW70 566 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 HEXDCQ8WVB3 486 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 LURAP1Q96LR2 239 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 NRTNQ99748 197 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 TRIM56Q9BRZ2 755 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 ASB8Q9H765 288 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 COG4Q9H9E3 785 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 SLC22A11Q9NSA0 550 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 DHCR7Q9UBM7 475 aaKnown RBP11.99□□□□□ -0.49
PABPC4-215ENST00000484555 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 FBXL4Q9UKA2 621 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 POLQO75417 2590 aa11.99□□□□□ -0.49
PABPC4-215ENST00000484555 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 IFRD1O00458 451 aaPredicted RBP11.98□□□□□ -0.49
PABPC4-215ENST00000484555 SOCS6O14544 535 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 ZSCAN9O15535 394 aaPredicted RBP11.98□□□□□ -0.49
PABPC4-215ENST00000484555 JRKO75564 520 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 ALBP02768 609 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 RALBP11234 206 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 GCGRP47871 477 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 NR2C2P49116 596 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 FOXL2P58012 376 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 XIAPP98170 497 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 MPP3Q13368 585 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 PTPRCAPQ14761 206 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 ZIC1Q15915 447 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 SLC5A12Q1EHB4 618 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 FAM180AQ6UWF9 173 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 HOOK3Q86VS8 718 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 DNAJC22Q8N4W6 341 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 BCORP1Q8N888 145 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 PHC3Q8NDX5 983 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 FLVCR1-AS1Q8TAF5 88 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 NAT14Q8WUY8 206 aa11.98□□□□□ -0.49
PABPC4-215ENST00000484555 TFB1MQ8WVM0 346 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms