RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CACUL1Q86Y37 369 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 MBNL1Q9NR56 388 aaKnown RBP13.72□□□□□ -0.21
CLK3-204ENST00000483723 POLG2Q9UHN1 485 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 FZD4Q9ULV1 537 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
CLK3-204ENST00000483723 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 DOCK9Q9BZ29 2069 aa13.72□□□□□ -0.21
CLK3-204ENST00000483723 LOC100653049A0A140TA62 436 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 ATP6AP2A0A1C7CYW4 349 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 ATP6AP2O75787 350 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 KRT34O76011 436 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 WDR47O94967 919 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.21
CLK3-204ENST00000483723 CAPN1P07384 714 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 ALDOCP09972 364 aaKnown RBP13.71□□□□□ -0.21
CLK3-204ENST00000483723 LBPP18428 481 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 PDHA2P29803 388 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 PREPP48147 710 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 ACADVLP49748 655 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 CCNG1P51959 295 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 CCINQ13939 588 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 GRB7Q14451 532 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
CLK3-204ENST00000483723 SYTL3Q4VX76 610 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 EOGTQ5NDL2 527 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 CDYL2Q8N8U2 506 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 FAM13CQ8NE31 585 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 METTL6Q8TCB7 284 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 HM13Q8TCT9 377 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 SKA2Q8WVK7 121 aaPredicted RBP13.71□□□□□ -0.21
CLK3-204ENST00000483723 CCDC138Q96M89 665 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 CDK15Q96Q40 435 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 LGR4Q9BXB1 951 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 SLC6A17Q9H1V8 727 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 DPEP2Q9H4A9 486 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 PREBQ9HCU5 417 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 TRPS1Q9UHF7 1281 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 PTGDR2Q9Y5Y4 395 aa13.71□□□□□ -0.21
CLK3-204ENST00000483723 LOC730098B7Z3J9 87 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GPR89AB7ZAQ6 455 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 NARSO43776 548 aaKnown RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 RNGTTO60942 597 aaKnown RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 KATNA1O75449 491 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 CATP04040 527 aaKnown RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 PCCBP05166 539 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ASGR2P07307 311 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GPR89BP0CG08 455 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 HGFP14210 728 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 RAP1GDS1P52306 607 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ADPRHP54922 357 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 PCDH1Q08174 1060 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GRIK2Q13002 908 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 CYLC2Q14093 348 aaPredicted RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 IRF4Q15306 451 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 PTCHD3Q3KNS1 767 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SLC44A4Q53GD3 710 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 Q6ZSR9 355 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SPATA19Q7Z5L4 167 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 HORMAD1Q86X24 394 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 TRAPPC5Q8IUR0 188 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 DEFB123Q8N688 67 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 OR14C36Q8NHC7 312 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 FAM3CQ92520 227 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SIPA1Q96FS4 1042 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 MARK4Q96L34 752 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 MRGPRX1Q96LB2 322 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SLC17A9Q9BYT1 436 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 RASSF4Q9H2L5 321 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 PCYT1BQ9Y5K3 369 aaPredicted RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 F5P12259 2224 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 A0A1W2PQU0 124 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 H3BM21 787 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SRFP11831 508 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GPX3P22352 226 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ACADLP28330 430 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 PFN3P60673 137 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
CLK3-204ENST00000483723 RPA4Q13156 261 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 INPP5AQ14642 412 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 TMEM92Q6UXU6 159 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 OXR1Q8N573 874 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 OR2T11Q8NH01 316 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 GANCQ8TET4 914 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 TUBGCP3Q96CW5 907 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 FOPNLQ96NB1 174 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 ZMYND15Q9H091 742 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 MMP17Q9ULZ9 603 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms