RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 IFT52Q9Y366 437 aa10.23□□□□□ -0.77
APTX-225ENST00000482687 PLXNA2O75051 1894 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 A0A1W2PQ67 120 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 KRBA1A5PL33 1030 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 SPINT1O43278 529 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 NARSO43776 548 aaKnown RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 STAMBPO95630 424 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 PKMP14618 531 aaKnown RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 ZNF26P17031 533 aaPredicted RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 CHRM3P20309 590 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 NR1D2Q14995 579 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 ACOX1Q15067 660 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 OXA1LQ15070 435 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 KCNJ8Q15842 424 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 ZNF648Q5T619 568 aaPredicted RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 C6orf183Q5T699 404 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 PAQR3Q6TCH7 311 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 C16orf89Q6UX73 402 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 NAPRTQ6XQN6 538 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 TMEM151AQ8N4L1 468 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 SLC44A3Q8N4M1 653 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 TMEM102Q8N9M5 508 aaPredicted RBP10.22□□□□□ -0.77
APTX-225ENST00000482687 LKAAEAR1Q8TD35 194 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 EXT2Q93063 718 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.22□□□□□ -0.77
APTX-225ENST00000482687 TAMM41Q96BW9 452 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 TCF12Q99081 682 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 EBF4Q9BQW3 602 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 ANKRD60Q9BZ19 345 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 C20orf27Q9GZN8 174 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 OLAHQ9NV23 265 aa10.22□□□□□ -0.77
APTX-225ENST00000482687 NEMP2A6NFY4 417 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 RGS13O14921 159 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 MTX2O75431 263 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 WISP3O95389 354 aaPredicted RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 KITP10721 976 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 COX4I1P13073 169 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 ACRV1P26436 265 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 CTHP32929 405 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 MMP12P39900 470 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 PTGER3P43115 390 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 CCR10P46092 362 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 ELAVL3Q14576 367 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 TRIM16LQ309B1 348 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 AARS2Q5JTZ9 985 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 AGAP7PQ5VUJ5 663 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 PTRHD1Q6GMV3 140 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 ERAP2Q6P179 960 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 ATG14Q6ZNE5 492 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 DET1Q7L5Y6 550 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 LILRA2Q8N149 483 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 CBARPQ8N350 705 aaPredicted RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 KDM1BQ8NB78 822 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 TMIEQ8NEW7 156 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 PIWIL2Q8TC59 973 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 LRIG1Q96JA1 1093 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 C1orf50Q9BV19 199 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 RIOK2Q9BVS4 552 aaKnown RBP10.21□□□□□ -0.77
APTX-225ENST00000482687 SLC6A17Q9H1V8 727 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 P2RY12Q9H244 342 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 ALG9Q9H6U8 611 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 CYP4F12Q9HCS2 524 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 RIC8BQ9NVN3 520 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 PKD2L2Q9NZM6 624 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 IKZF3Q9UKT9 509 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 TMPRSS11EQ9UL52 423 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 PIAS3Q9Y6X2 628 aa10.21□□□□□ -0.77
APTX-225ENST00000482687 A0A1B0GTW7 788 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 A0A1W2PPC1 479 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ANKRD34BA5PLL1 514 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 E5RI56 91 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 H3BMM5 538 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 H3BMQ9 156 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 MID1O15344 667 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ZBTB14O43829 449 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 DLX3O60479 287 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 MMP20O60882 483 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ATE1O95260 518 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 TRIM16O95361 564 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ELFN1P0C7U0 828 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 RALBP11234 206 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 TFEBP19484 476 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ITGB7P26010 798 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 KCNC1P48547 511 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 GRSF1Q12849 480 aaKnown RBP eCLIP10.21□□□□□ -0.78
APTX-225ENST00000482687 CNTN1Q12860 1018 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.78
APTX-225ENST00000482687 FLOT2Q14254 428 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 LSM12Q3MHD2 195 aaKnown RBP10.21□□□□□ -0.78
APTX-225ENST00000482687 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 KIAA1211LQ6NV74 962 aa10.21□□□□□ -0.78
APTX-225ENST00000482687 ISLR2Q6UXK2 745 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms