RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ABHD1Q96SE0 405 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 HIST1H2AJQ99878 128 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 NDC1Q9BTX1 674 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PANK2Q9BZ23 570 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 KLHL4Q9C0H6 718 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 ELOVL4Q9GZR5 314 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CUEDC2Q9H467 287 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 SERHL2Q9H4I8 314 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 ZSCAN16Q9H4T2 348 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 TMEM9BQ9NQ34 198 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PFDN4Q9NQP4 134 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 GIMAP4Q9NUV9 329 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 KCND3Q9UK17 655 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 BTBD3Q9Y2F9 522 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CPQQ9Y646 472 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PCNX2A6NKB5 2137 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 FRYQ5TBA9 3013 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 LNP1A1A4G5 178 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 BCLAF3A2AJT9 711 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 LRRD1A4D1F6 860 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ZNF840PA6NDX5 716 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A20PA6NIJ5 464 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 GLOD5A6NK44 160 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TMEM200CA6NKL6 621 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 C4orf47A7E2U8 309 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 EFCAB8A8MWE9 144 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 A8MXQ7 604 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 F2RL2O00254 374 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CLIC2O15247 247 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TNFSF14O43557 240 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 KIF1CO43896 1103 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 NRP2O60462 931 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TACC1O75410 805 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TRIM21P19474 475 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 SAT1P21673 171 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 LMO2P25791 158 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 SERPINA4P29622 427 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 PPARGP37231 505 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 SULT1E1P49888 294 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MXI1P50539 228 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CYP2J2P51589 502 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 NOP14P78316 857 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 SLC7A9P82251 487 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 GAD2Q05329 585 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CD69Q07108 199 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TAF10Q12962 218 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MRPL49Q13405 166 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 SLC39A14Q15043 492 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 RPS6KA2Q15349 733 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 TRADDQ15628 312 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 PREPLQ4J6C6 727 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 EOGTQ5NDL2 527 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CCDC183Q5T5S1 534 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 LIPMQ5VYY2 423 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MRNIPQ6NTE8 343 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 SCARA5Q6ZMJ2 495 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 NELFCDQ8IXH7 590 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 IQUBQ8NA54 791 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 XXYLT1Q8NBI6 393 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 OR5M3Q8NGP4 307 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 KIF18AQ8NI77 898 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 OVCA2Q8WZ82 227 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MR1Q95460 341 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 FBXO32Q969P5 355 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CCDC127Q96BQ5 260 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CYFIP2Q96F07 1278 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 PERPQ96FX8 193 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CCDC114Q96M63 670 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ZNF396Q96N95 335 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 PNKPQ96T60 521 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MED10Q9BTT4 135 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 NUSAP1Q9BXS6 441 aaKnown RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 TRIM9Q9C026 710 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 NACA2Q9H009 215 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 AGPAT3Q9NRZ7 376 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ANO10Q9NW15 660 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 NINJ2Q9NZG7 142 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 CFAP97Q9P2B7 532 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 SLC25A10Q9UBX3 287 aaPredicted RBP6.53□□□□□ -1.36
CLK1-212ENST00000482590 IL19Q9UHD0 177 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ZDHHC8Q9ULC8 765 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 MTMR6Q9Y217 621 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 POMT1Q9Y6A1 747 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ZFHX4Q86UP3 3567 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 WDFY3Q8IZQ1 3526 aa6.53□□□□□ -1.36
CLK1-212ENST00000482590 ATXN2Q99700 1313 aaKnown RBP6.52□□□□□ -1.37
CLK1-212ENST00000482590 AKAP13Q12802 2813 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 PTPRBP23467 1997 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 TRAV34A0A0B4J273 112 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 RNF103-CHMP3A0A140T963 221 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 TCRBV21S2A2A0A5A6 115 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 URADA6NGE7 173 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 MYO1GB0I1T2 1018 aa6.52□□□□□ -1.37
CLK1-212ENST00000482590 TMEM233B4DJY2 109 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms