RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LMNTD1Q8N9Z9 388 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 IFI44Q8TCB0 444 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 FOPNLQ96NB1 174 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 CNTNAP3BQ96NU0 1288 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TBC1D10AQ9BXI6 508 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 CNTNAP3Q9BZ76 1288 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
HDAC1-208ENST00000482310 WASH6PQ9NQA3 447 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 IKZF3Q9UKT9 509 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 U3KQA8 63 aa12.9□□□□□ -0.34
HDAC1-208ENST00000482310 SPEGQ15772 3267 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 A0A1W2PPM1 405 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 OR5K4A6NMS3 321 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 CDC7O00311 574 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 BTN3A1O00481 513 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 CDH16O75309 829 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 C2P06681 752 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 CNTFP26441 200 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 ACADLP28330 430 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 GLRBP48167 497 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 RPIAP49247 311 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
HDAC1-208ENST00000482310 PLOD1Q02809 727 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-208ENST00000482310 GPR18Q14330 331 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-208ENST00000482310 AMZ1Q400G9 498 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 CCSMST1Q4G0I0 132 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 OGFOD3Q6PK18 319 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-208ENST00000482310 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 C2orf73Q8N5S3 287 aaPredicted RBP12.89□□□□□ -0.35
HDAC1-208ENST00000482310 SLC38A3Q99624 504 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 XKR8Q9H6D3 395 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 SYTL2Q9HCH5 934 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 ABCF3Q9NUQ8 709 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 FETUBQ9UGM5 382 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 HEBP2Q9Y5Z4 205 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 CACNA1BQ00975 2339 aa12.89□□□□□ -0.35
HDAC1-208ENST00000482310 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 KIF26BQ2KJY2 2108 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ARHGEF33A8MVX0 844 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 TSPAN12O95859 305 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 MT-ND3P03897 115 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 MPC1LP0DKB6 136 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 CBSLP0DN79 551 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 PYGBP11216 843 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ENO3P13929 434 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 TYRP1P17643 537 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 XRCC1P18887 633 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 CD9P21926 228 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 CRABP2P29373 138 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ATP5DP30049 168 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 CBSP35520 551 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 LIMK1P53667 647 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 OR1D5P58170 312 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 DLG1Q12959 904 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 NKAIN2Q5VXU1 208 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 MBOAT1Q6ZNC8 495 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 TDRPQ86YL5 185 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 NKAPQ8N5F7 415 aaKnown RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 FAM181AQ8N9Y4 354 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 OR10G6Q8NH81 332 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 SCYL1Q96KG9 808 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 CCDC3Q9BQI4 270 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 POPDC3Q9HBV1 291 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ZNF358Q9NW07 568 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 KCNK4Q9NYG8 393 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 ACOT9Q9Y305 439 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 COLEC10Q9Y6Z7 277 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-208ENST00000482310 PTPRBP23467 1997 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
HDAC1-208ENST00000482310 A0A087X1B8 175 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 AGRPO00253 132 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 GIPC1O14908 333 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-208ENST00000482310 ZBTB14O43829 449 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
HDAC1-208ENST00000482310 RFPL1O75677 317 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 712.7 ms