RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MOSPD1Q9UJG1 213 aa9.93□□□□□ -0.82
USP39-215ENST00000481409 PTBP2Q9UKA9 531 aaKnown RBP9.93□□□□□ -0.82
USP39-215ENST00000481409 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.93□□□□□ -0.82
USP39-215ENST00000481409 COLEC10Q9Y6Z7 277 aa9.93□□□□□ -0.82
USP39-215ENST00000481409 LRP4O75096 1905 aa9.93□□□□□ -0.82
USP39-215ENST00000481409 THADAQ6YHU6 1953 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 KIR2DS5A0A0G2JLQ3 304 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 A0A0G2JNG1 304 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 KIR2DS3K7RE56 304 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 MYO1CO00159 1063 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SNNO75324 88 aaPredicted RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 C1orf105O95561 183 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 MLYCDO95822 493 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 FUCA1P04066 466 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 FGF3P11487 239 aaPredicted RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 CTSEP14091 401 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PGGT1BP53609 377 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 GNGT1P63211 74 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 EIF2B5Q13144 721 aaKnown RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 STX3Q13277 289 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 KIR2DS5Q14953 304 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CHI3L2Q15782 390 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CFAP157Q5JU67 520 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 ANKS6Q68DC2 871 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CEP68Q76N32 757 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 GKN2Q86XP6 184 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SYT12Q8IV01 421 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 HID1Q8IV36 788 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 VRK3Q8IV63 474 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 KLHDC8AQ8IYD2 350 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PHACTR4Q8IZ21 702 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 OR5K2Q8NHB8 316 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 TFGQ92734 400 aaPredicted RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 RHBDF1Q96CC6 855 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PDXPQ96GD0 296 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 C7orf26Q96N11 449 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SIKE1Q9BRV8 207 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 DRC3Q9H069 523 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 MIR1-1HGQ9H1L0 117 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 TRIT1Q9H3H1 467 aaKnown RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 MRPL40Q9NQ50 206 aaKnown RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 ARL15Q9NXU5 204 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CD274Q9NZQ7 290 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SPATA7Q9P0W8 599 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SPASTQ9UBP0 616 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 SLC23A2Q9UGH3 650 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 APOBEC3BQ9UH17 382 aaKnown RBP9.92□□□□□ -0.82
USP39-215ENST00000481409 PILRBQ9UKJ0 227 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PDE10AQ9Y233 779 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 INVSQ9Y283 1065 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 ASF1AQ9Y294 204 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 PCDHGA5Q9Y5G8 931 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 CSNK1G3Q9Y6M4 447 aa9.92□□□□□ -0.82
USP39-215ENST00000481409 TNRC6BQ9UPQ9 1833 aaKnown RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 SLCO1B7G3V0H7 640 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 UBXN8O00124 270 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 HRO43593 1189 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 KATNA1O75449 491 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 TGDSO95455 350 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 WNT1P04628 370 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 F3P13726 295 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 JUNDP17535 347 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PDHA2P29803 388 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 ACTR1BP42025 376 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PREPP48147 710 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 RXRGP48443 463 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 KCNC1P48547 511 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 DHPSP49366 369 aaPredicted RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 ARRB1P49407 418 aaPredicted RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 ACTR1AP61163 376 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 ABCE1P61221 599 aaKnown RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 IRX4P78413 519 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 RCN2Q14257 317 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PFKFB4Q16877 469 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 DUOXA1Q1HG43 343 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PLA2G4EQ3MJ16 856 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 ZNF678Q5SXM1 525 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 XKR5Q6UX68 686 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 LRRC70Q7Z2Q7 622 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 AFAP1L2Q8N4X5 818 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PTGR2Q8N8N7 351 aaPredicted RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 OR9A1PQ8NGU1 263 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 STON2Q8WXE9 905 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 TSACCQ96A04 125 aaPredicted RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 ZNF317Q96PQ6 595 aaPredicted RBP9.91□□□□□ -0.82
USP39-215ENST00000481409 EGFL8Q99944 293 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 PITPNM3Q9BZ71 974 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 EPN3Q9H201 632 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 OSGEPL1Q9H4B0 414 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 MLXIPLQ9NP71 852 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 POT1Q9NUX5 634 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 LNPEPQ9UIQ6 1025 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 HAO1Q9UJM8 370 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 DNAJC16Q9Y2G8 782 aa9.91□□□□□ -0.82
USP39-215ENST00000481409 KMT2EQ8IZD2 1858 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms