RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 MAGED4Q96JG8 741 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 C12orf66Q96MD2 445 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 INSM2Q96T92 566 aaPredicted RBP10.78□□□□□ -0.68
CCDC18-208ENST00000479653 SPRTNQ9H040 489 aaPredicted RBP10.78□□□□□ -0.68
CCDC18-208ENST00000479653 ZFYVE1Q9HBF4 777 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 TXLNGQ9NUQ3 528 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 IRAK4Q9NWZ3 460 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 ABI3Q9P2A4 366 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 SLC24A2Q9UI40 661 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 POMT2Q9UKY4 750 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 MEMO1Q9Y316 297 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 FLNAP21333 2647 aaKnown RBP10.78□□□□□ -0.68
CCDC18-208ENST00000479653 ABCA4P78363 2273 aa10.78□□□□□ -0.68
CCDC18-208ENST00000479653 SOCS6O14544 535 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 KCNJ13O60928 360 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 WISP2O76076 250 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 UQCRHP07919 91 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 MSL3P1P0C860 447 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 UNGP13051 313 aaPredicted RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PVRP15151 417 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 ALAS2P22557 587 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 AMPD1P23109 780 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PSMA2P25787 234 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PBLDP30039 288 aaPredicted RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 HCAR3P49019 387 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 TNFSF10P50591 281 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 GSCP56915 257 aaPredicted RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 RPL26P61254 145 aaKnown RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 CCZ1BP86790 482 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 CCZ1P86791 482 aaPredicted RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 OGDHQ02218 1023 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 DPYSQ14117 519 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 NFE2L1Q14494 772 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 SPA17Q15506 151 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 QPCTQ16769 361 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 LONRF1Q17RB8 773 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 TMEM198Q66K66 360 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 RHBDD2Q6NTF9 364 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 KIRREL2Q6UWL6 708 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 FAM83HQ6ZRV2 1179 aaPredicted RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 CDHR3Q6ZTQ4 885 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 IRF2BP2Q7Z5L9 587 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 BIVMQ86UB2 503 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PRIMA1Q86XR5 153 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 DNAAF3Q8N9W5 541 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 DNAJB8Q8NHS0 232 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 EID2BQ96D98 161 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PEBP4Q96S96 227 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PCDHB18PQ96TA0 734 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 ZNF559Q9BR84 538 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 WWP1Q9H0M0 922 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 DLL4Q9NR61 685 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 SEPT11Q9NVA2 429 aaKnown RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 ETNK2Q9NVF9 386 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 PTGFRNQ9P2B2 879 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 RPL26L1Q9UNX3 145 aaKnown RBP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 SHOC2Q9UQ13 582 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 ZKSCAN5Q9Y2L8 839 aa10.77□□□□□ -0.69
CCDC18-208ENST00000479653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC18-208ENST00000479653 CSPG4Q6UVK1 2322 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 SPTBP11277 2137 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 ANKRD66B4E2M5 251 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 ZSCAN12O43309 604 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 AKR1B10O60218 316 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 C8BP07358 591 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 CES1P23141 567 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 FOLH1Q04609 750 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 DSG2Q14126 1118 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 TUBB8Q3ZCM7 444 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 PDPK2PQ6A1A2 396 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 CXXC5Q7LFL8 322 aaKnown RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 PHF13Q86YI8 300 aaPredicted RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 TEX26Q8N6G2 289 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 ZNF655Q8N720 491 aaPredicted RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 PROKR1Q8TCW9 393 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 SDCCAG3Q96C92 435 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 TREX2Q9BQ50 279 aaPredicted RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 KCNF1Q9H3M0 494 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 SRMSQ9H3Y6 488 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 NHEJ1Q9H9Q4 299 aaPredicted RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 HS3ST3B1Q9Y662 390 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 EPN1Q9Y6I3 576 aaPredicted RBP10.76□□□□□ -0.69
CCDC18-208ENST00000479653 COLEC10Q9Y6Z7 277 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 SEC16AO15027 2179 aa10.76□□□□□ -0.69
CCDC18-208ENST00000479653 NSD1Q96L73 2696 aaPredicted RBP10.75□□□□□ -0.69
CCDC18-208ENST00000479653 C17orf113A0A1B0GUU1 675 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 TCRBV5S1A1TA0A578 114 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 GOLGA6L9A6NEM1 432 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 H3BRJ5 948 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 MATN2O00339 956 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 PRAMEF2O60811 474 aa10.75□□□□□ -0.69
CCDC18-208ENST00000479653 RNF8O76064 485 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms