RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FAM45BPQ6NSW5 357 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TRMT10BQ6PF06 316 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 CCDC81Q6ZN84 652 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SPRED1Q7Z699 444 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 ZC3HC1Q86WB0 502 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 SLC22A15Q8IZD6 547 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 RIBC1Q8N443 379 aaPredicted RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 SFRP1Q8N474 314 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 FBXO39Q8N4B4 442 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 CCL4L1Q8NHW4 92 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 FAM45AQ8TCE6 357 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 ASZ1Q8WWH4 475 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SLC44A1Q8WWI5 657 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TMEM159Q96B96 161 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 GFM1Q96RP9 751 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 RBBP8Q99708 897 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 AARSD1Q9BTE6 412 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 SPRY4Q9C004 299 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 TMEM168Q9H0V1 697 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 OR2AG1Q9H205 316 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SARS2Q9NP81 518 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 MRPL40Q9NQ50 206 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 STARD5Q9NSY2 213 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SPATS2LQ9NUQ6 558 aaKnown RBP8.71□□□□□ -1.02
DDX56-211ENST00000479602 POT1Q9NUX5 634 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 EURLQ9NYK6 297 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 PDP2Q9P2J9 529 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SLC24A2Q9UI40 661 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 RNF215Q9Y6U7 377 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.02
DDX56-211ENST00000479602 SPTAN1Q13813 2472 aaKnown RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 OR51F1A6NGY5 319 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 LILRA5A6NI73 299 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 C9orf172C9J069 976 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 INPP4BO15327 924 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 BANF1O75531 89 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 AHSGP02765 367 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CTSEP14091 401 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 HGFP14210 728 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 XRCC1P18887 633 aaPredicted RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 WT1P19544 449 aaPredicted RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 FDXRP22570 491 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 SSTR1P30872 391 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 ETV5P41161 510 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 GPR3P46089 330 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CDKN1CP49918 316 aaPredicted RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 CLCN7P51798 805 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 PMS2P54278 862 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 EPHA4P54764 986 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 UBE2IP63279 158 aaKnown RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 POU4F1Q01851 419 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 SRSF6Q13247 344 aaKnown RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 SP140Q13342 867 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 KYNUQ16719 465 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 ERCC6LQ2NKX8 1250 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 TTLL9Q3SXZ7 439 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 C14orf28Q4W4Y0 310 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 GRTP1Q5TC63 336 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 UGT3A1Q6NUS8 523 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 TMEM220Q6QAJ8 160 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 UNC5DQ6UXZ4 953 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 RD3Q7Z3Z2 195 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CROCCP2Q86T23 111 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 TRAPPC5Q8IUR0 188 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 DENND6AQ8IWF6 608 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CARFQ8N187 725 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 MYRIPQ8NFW9 859 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 IFT81Q8WYA0 676 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 MTBPQ96DY7 904 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 C9orf72Q96LT7 481 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 TMEM74Q96NL1 305 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 TRIM56Q9BRZ2 755 aaKnown RBP8.7□□□□□ -1.02
DDX56-211ENST00000479602 PARD6BQ9BYG5 372 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 OR52A5Q9H2C5 316 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 COG4Q9H9E3 785 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 LRIT1Q9P2V4 623 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 CDYLQ9Y232 598 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 DHRS7Q9Y394 339 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 PCDHGA3Q9Y5H0 932 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 HEBP2Q9Y5Z4 205 aa8.7□□□□□ -1.02
DDX56-211ENST00000479602 SPENQ96T58 3664 aaKnown RBP8.69□□□□□ -1.02
DDX56-211ENST00000479602 CCL22O00626 93 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 ERLIN1O75477 346 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 POP7O75817 140 aaKnown RBP8.69□□□□□ -1.02
DDX56-211ENST00000479602 FKBP9O95302 570 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 APOA4P06727 396 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 MPC1LP0DKB6 136 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 ERVK-10P10266 1014 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 LIPCP11150 499 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 IDSP22304 550 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 ACADLP28330 430 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 CD1CP29017 333 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 SPRP35270 261 aaPredicted RBP8.69□□□□□ -1.02
DDX56-211ENST00000479602 GNPDA1P46926 289 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 EIF3BP55884 814 aaKnown RBP8.69□□□□□ -1.02
DDX56-211ENST00000479602 TMPRSS15P98073 1019 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 TMED2Q15363 201 aa8.69□□□□□ -1.02
DDX56-211ENST00000479602 KBTBD12Q3ZCT8 623 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms