RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 MTERF1Q99551 399 aaKnown RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 TXLNGYQ9BZA5 131 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 SPAG4Q9NPE6 437 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 B4DGG1 531 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 OR10H2O60403 315 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 ASGR2P07307 311 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 MED21Q13503 144 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TBCELQ5QJ74 424 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 CPTPQ5TA50 214 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 KIAA1161Q6NSJ0 714 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 LRRC70Q7Z2Q7 622 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TEX26Q8N6G2 289 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 MRPS30Q9NP92 439 aaKnown RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 PRKAG3Q9UGI9 489 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TTC3P53804 2025 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 IGLV3-27P01718 113 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 SLC35E2BP0CK96 405 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 ATP6V1E1P36543 226 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 GDF5P43026 501 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 CRATP43155 626 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 RPL6Q02878 288 aaKnown RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 ANXA8L1Q5VT79 327 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 EGFLAMQ63HQ2 1017 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 GCNT7Q6ZNI0 430 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 DSELQ8IZU8 1212 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 AVL9Q8NBF6 648 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 NELL1Q92832 810 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 OR2M4Q96R27 311 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TPSD1Q9BZJ3 242 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 CCDC90BQ9GZT6 254 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 C1orf109Q9NX04 203 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TMCC3Q9ULS5 477 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 SNX5Q9Y5X3 404 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 TRPM7Q96QT4 1865 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 KLF11O14901 512 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 SEMA4FO95754 770 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 FCGR1AP12314 374 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 PCSK2P16519 638 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 BDKRB1P46663 353 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 SP140Q13342 867 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 ZNF77Q15935 545 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 INTS11Q5TA45 600 aaKnown RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 CYP4V2Q6ZWL3 525 aaPredicted RBP11.78□□□□□ -0.52
PCCB-214ENST00000478469 ITCHQ96J02 903 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 CDK15Q96Q40 435 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 FANCEQ9HB96 536 aa11.78□□□□□ -0.52
PCCB-214ENST00000478469 NUMA1Q14980 2115 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 A0A0U1RQS6 177 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 PSMD11O00231 422 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 AURKAO14965 403 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 LAMTOR5O43504 91 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 ZNF217O75362 1048 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 OXTRP30559 389 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 CCT8P50990 548 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 WASHC2DQ5SRD0 308 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 ZNF648Q5T619 568 aaPredicted RBP11.77□□□□□ -0.52
PCCB-214ENST00000478469 ZNF549Q6P9A3 640 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 CPSF7Q8N684 471 aaKnown RBP11.77□□□□□ -0.52
PCCB-214ENST00000478469 ZSWIM3Q96MP5 696 aa11.77□□□□□ -0.52
PCCB-214ENST00000478469 MUSKO15146 869 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ITM2AO43736 263 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ADSLP30566 484 aaPredicted RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 IDH3AP50213 366 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 C2orf80Q0P641 193 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 PARS2Q7L3T8 475 aaKnown RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 CYP2U1Q7Z449 544 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 USP7Q93009 1102 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 NAF1Q96HR8 494 aaKnown RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 C6orf203Q9P0P8 240 aaPredicted RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 STX18Q9P2W9 335 aaKnown RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 PACSIN3Q9UKS6 424 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ZNF780BQ9Y6R6 833 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 PRPS2P11908 318 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ZNF8P17098 575 aaPredicted RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 ATP6V1B2P21281 511 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 VHLP40337 213 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 MAPK12P53778 367 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 PCLAFQ15004 111 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 CYP4Z1Q86W10 505 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 CEP97Q8IW35 865 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 TMEM145Q8NBT3 493 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 MDGA1Q8NFP4 955 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 OR9A1PQ8NGU1 263 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 WFDC5Q8TCV5 224 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ARMC7Q9H6L4 198 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 ADPRHL2Q9NX46 363 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 SIRPGQ9P1W8 387 aa11.77□□□□□ -0.53
PCCB-214ENST00000478469 RUVBL1Q9Y265 456 aaKnown RBP11.77□□□□□ -0.53
PCCB-214ENST00000478469 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms