RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 HIPK1Q86Z02 1210 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 SLC9A6Q92581 669 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 KCNJ9Q92806 393 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 IRF7Q92985 503 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 PRICKLE1Q96MT3 831 aaPredicted RBP13.96□□□□□ -0.18
NPHP4-208ENST00000478423 SLC38A2Q96QD8 506 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 ITM2CQ9NQX7 267 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 INTS7Q9NVH2 962 aaKnown RBP13.96□□□□□ -0.18
NPHP4-208ENST00000478423 CLDND1Q9NY35 253 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 ERGIC3Q9Y282 383 aa13.96□□□□□ -0.18
NPHP4-208ENST00000478423 NUMA1Q14980 2115 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 MATN2O00339 956 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 PCSK2P16519 638 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 XRCC1P18887 633 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 NRIP1P48552 1158 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 GRSF1Q12849 480 aaKnown RBP eCLIP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 GPRC6AQ5T6X5 926 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 RNF44Q7L0R7 432 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 TXNDC5Q8NBS9 432 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 C3orf58Q8NDZ4 430 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 LMLNQ96KR4 655 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 Q96MT0 163 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 IL12RB2Q99665 862 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 MRPS26Q9BYN8 205 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 BRINP2Q9C0B6 783 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 SMPD3Q9NY59 655 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 PDP1Q9P0J1 537 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 A0A0G2JN53 185 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 CYP11A1P05108 521 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 SLC35G6P0C7Q6 338 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 HLA-EP13747 358 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 VIPR1P32241 457 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 HSPB3Q12988 150 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 TGFBIQ15582 683 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 GCNT6Q5T4J0 391 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 DERL2Q9GZP9 239 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 FBXW2Q9UKT8 454 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 POP7O75817 140 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 ETS2P15036 469 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 ZNF30P17039 623 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 CDH3P22223 829 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 CTSKP43235 329 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 CCR10P46092 362 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 STK19P49842 368 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 STX4Q12846 297 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 PTCHD3Q3KNS1 767 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 FRG2Q64ET8 278 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 ARL10Q8N8L6 244 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 OR52J3Q8NH60 311 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 MYDGFQ969H8 173 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 FRG2BQ96QU4 278 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 RAD9AQ99638 391 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 TRMT61BQ9BVS5 477 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 CHID1Q9BWS9 393 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 MRM3Q9HC36 420 aaKnown RBP13.95□□□□□ -0.18
NPHP4-208ENST00000478423 FAM53CQ9NYF3 392 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 VPS29Q9UBQ0 182 aa13.95□□□□□ -0.18
NPHP4-208ENST00000478423 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SAP18O00422 153 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 HNMTP50135 292 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 DGKQP52824 942 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 C21orf59P57076 290 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SLC5A9Q2M3M2 681 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 LUZP2Q86TE4 346 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 PARP8Q8N3A8 854 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 ARFGAP1Q8N6T3 406 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SIPA1Q96FS4 1042 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 DUSP26Q9BV47 211 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 LMAN2LQ9H0V9 348 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 MTRRQ9UBK8 725 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SUCOQ9UBS9 1254 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 M0QZQ0 153 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 MMP20O60882 483 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 ZBTB11O95625 1053 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 CCDC159P0C7I6 412 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 FGF3P11487 239 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 IGFBP5P24593 272 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 PSMA3P25788 255 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 RPL4P36578 427 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 DPY19L1Q2PZI1 675 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 EPGNQ6UW88 154 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 OR4F6Q8NGB9 312 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 EFCAB11Q9BUY7 163 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 LRRC3Q9BY71 257 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 NLE1Q9NVX2 485 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 PPM1HQ9ULR3 514 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms