RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CD300AQ9UGN4 299 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 MSRAQ9UJ68 235 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 RALYQ9UKM9 306 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 CRYL1Q9Y2S2 319 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 AP4S1Q9Y587 144 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHB7Q9Y5E2 793 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ARL5AQ9Y689 179 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 COMMD10Q9Y6G5 202 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 COMMD3-BMI1R4GMX3 469 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SCN5AQ14524 2016 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 GVINP1Q7Z2Y8 2422 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 HELZP42694 1942 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SPTBN2O15020 2390 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TET1Q8NFU7 2136 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SETXQ7Z333 2677 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 A0A0J9YYE9 177 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 A0A1B0GVM2 712 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 UBA6A0AVT1 1052 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ILVBLA1L0T0 632 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PRAMEF27A3QJZ7 478 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PRORSD1PA6NEY8 169 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 AQP12BA6NM10 295 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 UBXN8O00124 270 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 NR5A2O00482 541 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CCL22O00626 93 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ANGPT2O15123 496 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MUSKO15146 869 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 INSIG1O15503 277 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 KLK8O60259 260 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TBC1D4O60343 1298 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CLASP2O75122 1294 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 VPS26AO75436 327 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CLDN11O75508 207 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CRCPO75575 148 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RNASEH2AO75792 299 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 VNN2O95498 520 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MLYCDO95822 493 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TBX18O95935 607 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CHEK2O96017 543 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ALDH2P05091 517 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RHOCP08134 193 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RPS17P08708 135 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ALDOCP09972 364 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MTHFD2P13995 350 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 HSD17B1P14061 328 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PKMP14618 531 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 IDO1P14902 403 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PSMC3P17980 439 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CR2P20023 1033 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TCN1P20061 433 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 LPOP22079 712 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 EEF1DP29692 281 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MSX2P35548 267 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ATP5C1P36542 298 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RPL5P46777 297 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 KCNC1P48547 511 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TUFMP49411 452 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TTPAP49638 278 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CLCN4P51793 760 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SLC7A2P52569 658 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ARPP19P56211 112 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 POLE2P56282 527 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TXNL4AP83876 142 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 TIAL1Q01085 375 aaKnown RBP eCLIP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CREB5Q02930 508 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 LCP2Q13094 533 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 SEMA3AQ14563 771 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 INPP5AQ14642 412 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.635e-10■□□□□ 10.1
SF3B6-202ENST00000478050 RPS6KA2Q15349 733 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 OR4D1Q15615 310 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PPP1R3AQ16821 1122 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PFKFB4Q16877 469 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 C21orf62-AS1Q17RA5 79 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 GEN1Q17RS7 908 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 USP41Q3LFD5 358 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 AARS2Q5JTZ9 985 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 IL23RQ5VWK5 629 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 IL31Q6EBC2 164 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CLEC6AQ6EIG7 209 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 UGT3A1Q6NUS8 523 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 KLHDC10Q6PID8 442 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 LRFN4Q6PJG9 635 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 VHLLQ6RSH7 139 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CYHR1Q6ZMK1 362 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF783Q6ZMS7 281 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RPS27LQ71UM5 84 aaKnown RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 LRRC8DQ7L1W4 858 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 GLT6D1Q7Z4J2 308 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 KIAA0907Q7Z7F0 614 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 DHFR2Q86XF0 187 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 PHYKPLQ8IUZ5 450 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 FUNDC1Q8IVP5 155 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 HERC6Q8IVU3 1022 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 AQP12AQ8IXF9 295 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 DDIASQ8IXT1 998 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 RYBPQ8N488 228 aaPredicted RBP4.87□□□□□ -1.63
SF3B6-202ENST00000478050 CHCHD4Q8N4Q1 142 aa4.87□□□□□ -1.63
SF3B6-202ENST00000478050 MINDY1Q8N5J2 469 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms