RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 F5H6K3 240 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CXCL11O14625 94 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 WDR46O15213 610 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 BCAT2O15382 392 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 PFKFB2O60825 505 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 PAGE4O60829 102 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 SEC31AO94979 1220 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 CCNDBP1O95273 360 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 TBX18O95935 607 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CD4P01730 458 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CYC1P08574 325 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 HSPA1AP0DMV8 641 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 HSPA1BP0DMV9 641 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 CDH2P19022 906 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 CHMP24386 653 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 MAN1A1P33908 653 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 HARS2P49590 506 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 HMGCS2P54868 508 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 BACE1P56817 501 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 KLRC3Q07444 240 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 PPIL2Q13356 520 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 FGFBP1Q14512 234 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 TSTQ16762 297 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 SHROOM1Q2M3G4 852 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 ASPRV1Q53RT3 343 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 KCNT1Q5JUK3 1230 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 FAAH2Q6GMR7 532 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 METTL2BQ6P1Q9 378 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 FASTKD5Q7L8L6 764 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 GSTA5Q7RTV2 222 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CCDC83Q8IWF9 413 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 SLC35F3Q8IY50 421 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 METTL27Q8N6F8 245 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 FAM184AQ8NB25 1140 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 GMCL1P1Q8NEA9 526 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 HUS1BQ8NHY5 278 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 MAGEC3Q8TD91 643 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 ACER1Q8TDN7 264 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CHURC1Q8WUH1 139 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 HDAC2Q92769 488 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 ABTB1Q969K4 478 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 OPTNQ96CV9 577 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 METTL2AQ96IZ6 378 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 LZTS2Q9BRK4 669 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 VCPKMTQ9H867 229 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 IRAK4Q9NWZ3 460 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 SEC63Q9UGP8 760 aaKnown RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 FBXO9Q9UK97 447 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 SMC3Q9UQE7 1217 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 CAPN7Q9Y6W3 813 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 PTPRFP10586 1907 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 PASKQ96RG2 1323 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 TP53BP1Q12888 1972 aaPredicted RBP3.91□□□□□ -1.78
UBR3-209ENST00000477461 BAZ2BQ9UIF8 2168 aaKnown RBP3.9□□□□□ -1.78
UBR3-209ENST00000477461 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 CCL15-CCL14A0A0B4J2E2 113 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 TMEM202A6NGA9 273 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 DVL1O14640 695 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 EDIL3O43854 480 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 NDUFB10O96000 172 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ZNF883P0CG24 379 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 GOLGA8HP0CJ92 632 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 PDHBP11177 359 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ICAM3P32942 547 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 GNL1P36915 607 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 RXRGP48443 463 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 NOVP48745 357 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 STAT2P52630 851 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 DVL1P1P54792 670 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 EVCP57679 992 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ISL1P61371 349 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 OLR1P78380 273 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 IRX3P78415 501 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 HMGN5P82970 282 aaKnown RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 TRIM29Q14134 588 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 CCL15Q16663 113 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 C2orf68Q2NKX9 166 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ALG11Q2TAA5 492 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 CST9Q5W186 159 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 FBXO46Q6PJ61 603 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 LCTLQ6UWM7 567 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 KCTD8Q6ZWB6 473 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 DGLUCYQ7Z3D6 616 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 TDRPQ86YL5 185 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ADSSL1Q8N142 457 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ZBTB2Q8N680 514 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 NECAB1Q8N987 351 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 DBF4BQ8NFT6 615 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 PIBF1Q8WXW3 757 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 GTF3C6Q969F1 213 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 PABPC5Q96DU9 382 aaKnown RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 ZNF583Q96ND8 569 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 PIP5K1AQ99755 562 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 CMKLR1Q99788 373 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 SLF1Q9BQI6 1058 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 LLPHQ9BRT6 129 aaKnown RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 TKTL2Q9H0I9 626 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms