RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 PRSS36Q5K4E3 855 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 SLC2A7Q6PXP3 512 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 PPM1MQ96MI6 270 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ACTR8Q9H981 624 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 NDUFAF1Q9Y375 327 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 SCN8AQ9UQD0 1980 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ARHGAP10A1A4S6 786 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 C16orf96A6NNT2 1141 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 FKBP6O75344 327 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MLYCDO95822 493 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 ELFN1P0C7U0 828 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MTHFD1P11586 935 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 GRIA3P42263 894 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 NAA20P61599 178 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 GALNT1Q10472 559 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 NFYCQ13952 458 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SLC15A3Q8IY34 581 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 FAM149AA5PLN7 773 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 LRATO95237 230 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 FGF4P08620 206 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 IL12AP29459 219 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SHHQ15465 462 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 NRF1Q16656 503 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 IYDQ6PHW0 289 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 B3GNT6Q6ZMB0 384 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MMAAQ8IVH4 418 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 ICA1LQ8NDH6 482 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 FGF13Q92913 245 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MED8Q96G25 268 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 PKP2Q99959 881 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 INTS7Q9NVH2 962 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 NUDT4Q9NZJ9 180 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 TBC1D14Q9P2M4 693 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SLC22A14Q9Y267 594 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 RBMX2Q9Y388 322 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 STX16O14662 325 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 WDR47O94967 919 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 B3GALT4O96024 378 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 MSH3P20585 1137 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 RXRGP48443 463 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 KCNK10P57789 538 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 RPL26P61254 145 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 IMPG1Q17R60 797 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 PARS2Q7L3T8 475 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 KBTBD6Q86V97 674 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SPPL2CQ8IUH8 684 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 LILRA2Q8N149 483 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 AP2M1Q96CW1 435 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 LRGUKQ96M69 825 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 PRPF19Q9UMS4 504 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 PDE10AQ9Y233 779 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
HDAC7-221ENST00000477203 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 SNX13Q9Y5W8 968 aa13.11□□□□□ -0.31
HDAC7-221ENST00000477203 ALPK3Q96L96 1907 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 NME4O00746 187 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 TSPAN6O43657 245 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 OR56A5P0C7T3 313 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 ATP1B2P14415 290 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 MAPRE2Q15555 327 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 ZXDCQ2QGD7 858 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 TXNDC11Q6PKC3 985 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 RHBDF1Q96CC6 855 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 NRTNQ99748 197 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 PKD2L2Q9NZM6 624 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 ZNF490Q9ULM2 529 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 SLC8A2Q9UPR5 921 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 A0A0C4DFX4 3053 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 TMEM247A6NEH6 219 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 MMP20O60882 483 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 SEC22BO75396 215 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 NELFEP18615 380 aaKnown RBP13.1□□□□□ -0.31
HDAC7-221ENST00000477203 TTLL9Q3SXZ7 439 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
HDAC7-221ENST00000477203 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms