RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-205ENST00000477174 SEC31AO94979 1220 aaKnown RBP13.05□□□□□ -0.32
ACTN4-205ENST00000477174 TUBB4AP04350 444 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 RPN2P04844 631 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 LIPCP11150 499 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 SEPHS1P49903 392 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 HSD11B2P80365 405 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CBLBQ13191 982 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CLN3Q13286 438 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 COL28A1Q2UY09 1125 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
ACTN4-205ENST00000477174 PLEKHS1Q5SXH7 462 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 ANKS6Q68DC2 871 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 ZNF470Q6ECI4 717 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CYB5D1Q6P9G0 228 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CEACAM20Q6UY09 585 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 BPHLQ86WA6 291 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-205ENST00000477174 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 LKAAEAR1Q8TD35 194 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 MAP3K3Q99759 626 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 TRIM51Q9BSJ1 452 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 FAM167BQ9BTA0 163 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 OR6C2Q9NZP2 312 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 CRYL1Q9Y2S2 319 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 ZFHX4Q86UP3 3567 aa13.05□□□□□ -0.32
ACTN4-205ENST00000477174 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 BTN3A3O00478 584 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 TP73O15350 636 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-205ENST00000477174 PKMP14618 531 aaKnown RBP13.04□□□□□ -0.32
ACTN4-205ENST00000477174 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-205ENST00000477174 CHRM3P20309 590 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 SHMT2P34897 504 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ARL4DP49703 201 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ITGA8P53708 1063 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ARL4CP56559 192 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 PPP1CAP62136 330 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ABRQ12979 859 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 CTBP1Q13363 440 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 CRYMQ14894 314 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 HIF1AQ16665 826 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 BBS9Q3SYG4 887 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 HSP90AA5PQ58FG0 334 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 SPANXN3Q5MJ09 141 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ZFAND4Q86XD8 727 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 VRK3Q8IV63 474 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ERP44Q9BS26 406 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 HGH1Q9BTY7 390 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 SPRY4Q9C004 299 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 IL1RAPL1Q9NZN1 696 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 POMT2Q9UKY4 750 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 MRFAP1Q9Y605 127 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 COMMD10Q9Y6G5 202 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 ITPR1Q14643 2758 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
ACTN4-205ENST00000477174 NBEAQ8NFP9 2946 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 C2orf74A8MZ97 194 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 MAP3K7O43318 606 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PRDX3P30048 256 aaKnown RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 ATP5DP30049 168 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 SH3BP2P78314 561 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 FOXM1Q08050 763 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 UNC5AQ6ZN44 842 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 KCNMB4Q86W47 210 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 ADGRF3Q8IZF5 1079 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 D2HGDHQ8N465 521 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 SIDT2Q8NBJ9 832 aaKnown RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PMEPA1Q969W9 287 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 FOPNLQ96NB1 174 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 FCRL4Q96PJ5 515 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 OR6C1Q96RD1 312 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 CCNL2Q96S94 520 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 CTRCQ99895 268 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PRORYQ9H606 182 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 WHRNQ9P202 907 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
ACTN4-205ENST00000477174 CDC23Q9UJX2 597 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms