RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 C7orf72A4D263 438 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 FADS2P1A8MWK0 482 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 UPK3BL1B0FP48 263 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 UPK3BL2E5RIL1 263 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 FFAR3O14843 346 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 SLC16A5O15375 505 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 GPR42O15529 346 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 RGS14O43566 566 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 TLL1O43897 1013 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 PAX7P23759 505 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 RPL38P63173 70 aaKnown RBP11.25□□□□□ -0.61
NUP188-205ENST00000477069 LIPEQ05469 1076 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 ARHGEF7Q14155 803 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 SERPINA13PQ6UXR4 307 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 NEK10Q6ZWH5 1172 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
NUP188-205ENST00000477069 DET1Q7L5Y6 550 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 ARPINQ7Z6K5 226 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 TCAIMQ8N3R3 496 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 DDHD1Q8NEL9 900 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 PIP4K2CQ8TBX8 421 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 HERVK_113Q902F9 699 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 SCAMP4Q969E2 229 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 TMEM74Q96NL1 305 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 COQ10BQ9H8M1 238 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 DKK3Q9UBP4 350 aa11.25□□□□□ -0.61
NUP188-205ENST00000477069 C2orf16Q68DN1 1984 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 DHRS12A0PJE2 317 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 XYLBO75191 536 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 TIPRLO75663 272 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 SMIM18P0DKX4 95 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 SYN1P17600 705 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
NUP188-205ENST00000477069 OXTRP30559 389 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 GRIA2P42262 883 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 DPPA4Q7L190 304 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 TECPR1Q7Z6L1 1165 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 HID1Q8IV36 788 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 TRAM1L1Q8N609 369 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 HCAR2Q8TDS4 363 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 EME1Q96AY2 570 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 FAM83DQ9H4H8 585 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 ARL15Q9NXU5 204 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 KLQ9UEF7 1012 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 IL36AQ9UHA7 158 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 ZNF490Q9ULM2 529 aaPredicted RBP11.24□□□□□ -0.61
NUP188-205ENST00000477069 SNX13Q9Y5W8 968 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 TXNDC9O14530 226 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 AP2A2O94973 939 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 CLDN9O95484 217 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 CYP17A1P05093 508 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 SRPRAP08240 638 aaKnown RBP11.24□□□□□ -0.61
NUP188-205ENST00000477069 HTR1EP28566 365 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 ETV3P41162 512 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 RECQLP46063 649 aaPredicted RBP11.24□□□□□ -0.61
NUP188-205ENST00000477069 CLCN2P51788 898 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 HMGCS1Q01581 520 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 DHCR24Q15392 516 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 C6orf52Q5T4I8 152 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 Q6ZVL8 140 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 RGL4Q8IZJ4 473 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 GALNT4Q8N4A0 578 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 RSPRY1Q96DX4 576 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 MTG2Q9H4K7 406 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 Q9H521 79 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 AGPAT4Q9NRZ5 378 aa11.24□□□□□ -0.61
NUP188-205ENST00000477069 ULK1O75385 1050 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 MTX2O75431 263 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 STAMBPO95630 424 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 SLC2A4P14672 509 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 PRPH2P23942 346 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 HRH2P25021 359 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 HNMTP50135 292 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 HSPA14Q0VDF9 509 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 MAD2L1Q13257 205 aaPredicted RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 GK3PQ14409 553 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 PTGR1Q14914 329 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 USP39Q53GS9 565 aaKnown RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 ZNF805Q5CZA5 627 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 PSRC1Q6PGN9 363 aaPredicted RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 AMIGO2Q86SJ2 522 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 CHERPQ8IWX8 916 aaKnown RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 LRIG1Q96JA1 1093 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 TRAPPC9Q96Q05 1148 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 SLC29A1Q99808 456 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 P2RY13Q9BPV8 354 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 KCTD14Q9BQ13 255 aaPredicted RBP11.23□□□□□ -0.61
NUP188-205ENST00000477069 USP22Q9UPT9 525 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 RWDD3Q9Y3V2 267 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
NUP188-205ENST00000477069 HNRNPRO43390 633 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms