RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SMYD2Q9NRG4 433 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 PLAGL1Q9UM63 463 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 ICKQ9UPZ9 632 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 ASF1AQ9Y294 204 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 PCDHGA8Q9Y5G5 932 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 HEBP2Q9Y5Z4 205 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 PSAT1Q9Y617 370 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 NFS1Q9Y697 457 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 CHD8Q9HCK8 2581 aa9.43□□□□□ -0.9
HDAC3-208ENST00000476739 MAP1BP46821 2468 aaKnown RBP9.43□□□□□ -0.9
HDAC3-208ENST00000476739 ACACBO00763 2458 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CTAGE15A4D2H0 777 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 OR6C74A6NCV1 312 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 EFCAB7A8K855 629 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TMX2-CTNND1H3BSU7 103 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 BTN3A1O00481 513 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 HGSO14964 777 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CLGNO14967 610 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 PFDN6O15212 129 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 APOA4P06727 396 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CTAGE8P0CG41 777 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 POLR2CP19387 275 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 BDKRB1P46663 353 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 SEPHS1P49903 392 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 MAPK10P53779 464 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 GPX6P59796 221 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TRA2AQ13595 282 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CUL1Q13616 776 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TUBB2AQ13885 445 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 GRB7Q14451 532 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ST3GAL2Q16842 350 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TBC1D25Q3MII6 688 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CCSMST1Q4G0I0 132 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ACSBG2Q5FVE4 666 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 UBAP2Q5T6F2 1119 aaKnown RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 OTOAQ7RTW8 1153 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CTAGE6Q86UF2 777 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 PLXDC1Q8IUK5 500 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CTAGE4Q8IX94 777 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ZBTB2Q8N680 514 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 OR5K2Q8NHB8 316 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 GSDMBQ8TAX9 411 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ZFPM2Q8WW38 1151 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 LCN9Q8WX39 176 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 GPR21Q99679 349 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 MAP3K3Q99759 626 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CMKLR1Q99788 373 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 DPYSL5Q9BPU6 564 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 AARSD1Q9BTE6 412 aaKnown RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TUBB2BQ9BVA1 445 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TFB2MQ9H5Q4 396 aaKnown RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 MVB12BQ9H7P6 319 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ZDHHC18Q9NUE0 388 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 HRASLS2Q9NWW9 162 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 FOXJ2Q9P0K8 574 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 DKK4Q9UBT3 224 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 TDRKHQ9Y2W6 561 aaKnown RBP9.42□□□□□ -0.9
HDAC3-208ENST00000476739 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CEP295Q9C0D2 2601 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 CELSR3Q9NYQ7 3312 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 IGF2RP11717 2491 aa9.42□□□□□ -0.9
HDAC3-208ENST00000476739 APC2O95996 2303 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 IGHV5-51A0A0C4DH38 117 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 TMEM8BA6NDV4 472 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 CXorf49A8MYA2 514 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-208ENST00000476739 C9orf172C9J069 976 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 E5RI56 91 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 F8W8V4 182 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 H3BMM5 538 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 NDC80O14777 642 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 EIF3HO15372 352 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDAC3-208ENST00000476739 PRAMEF10O60809 474 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 C1QAP02745 245 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 JMJD7P0C870 316 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 NDUFS1P28331 727 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 ECHS1P30084 290 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 SLC5A2P31639 672 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 KPNA2P52292 529 aaKnown RBP9.41□□□□□ -0.9
HDAC3-208ENST00000476739 CDKN2DP55273 166 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 SH3BP2P78314 561 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 EIF3IQ13347 325 aaKnown RBP9.41□□□□□ -0.9
HDAC3-208ENST00000476739 FRG1Q14331 258 aaKnown RBP9.41□□□□□ -0.9
HDAC3-208ENST00000476739 TMED2Q15363 201 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 KLHL38Q2WGJ6 581 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 PLEKHS1Q5SXH7 462 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 CACHD1Q5VU97 1274 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 CCDC25Q86WR0 208 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 TBC1D21Q8IYX1 336 aa9.41□□□□□ -0.9
HDAC3-208ENST00000476739 ADGRF3Q8IZF5 1079 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms