RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TPBGLP0DKB5 382 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 PLOD1Q02809 727 aaPredicted RBP10.47□□□□□ -0.73
SEC13-214ENST00000476597 PCID2Q5JVF3 399 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 AFTPHQ6ULP2 937 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 NAPRTQ6XQN6 538 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 ZNF517Q6ZMY9 492 aaPredicted RBP10.47□□□□□ -0.73
SEC13-214ENST00000476597 TMEM126BQ8IUX1 230 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 LRRC8AQ8IWT6 810 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TBC1D21Q8IYX1 336 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 CCDC89Q8N998 374 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 SLC38A9Q8NBW4 561 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 OR5AR1Q8NGP9 310 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 ELMO1Q92556 727 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.47□□□□□ -0.73
SEC13-214ENST00000476597 ABHD17AQ96GS6 310 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 LRFN5Q96NI6 719 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TTC1Q99614 292 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TLR10Q9BXR5 811 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TWSG1Q9GZX9 223 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 XKR8Q9H6D3 395 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 LZTFL1Q9NQ48 299 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 CHRAC1Q9NRG0 131 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 SOHLH2Q9NX45 425 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 FARSAQ9Y285 508 aaKnown RBP10.47□□□□□ -0.73
SEC13-214ENST00000476597 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 TCAF1Q9Y4C2 921 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 HECTD1Q9ULT8 2610 aa10.47□□□□□ -0.73
SEC13-214ENST00000476597 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 CDC14CA4D256 554 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 PYCARD-AS1I3L0S3 204 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 CPNE3O75131 537 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 FGGP02679 453 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 CCDC175P0C221 793 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 ST6GAL1P15907 406 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 PTPN4P29074 926 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 CCR7P32248 378 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 PPARGP37231 505 aaPredicted RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 RPS15P62841 145 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 KCNC4Q03721 635 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 GPS2Q13227 327 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 SEMA3AQ14563 771 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 BRD3Q15059 726 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 FASTKD1Q53R41 847 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 PLEKHS1Q5SXH7 462 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 PRAMEF17Q5VTA0 474 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 C4orf22Q6V702 233 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 UNC5AQ6ZN44 842 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 PTRH1Q86Y79 214 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 OR1L3Q8NH93 324 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 OR5K2Q8NHB8 316 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 C9orf43Q8TAL5 461 aaPredicted RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 MAIP1Q8WWC4 291 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 SEC14L1Q92503 715 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 HGH1Q9BTY7 390 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 CARD6Q9BX69 1037 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 ZNF71Q9NQZ8 489 aaPredicted RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 EIF2B3Q9NR50 452 aaKnown RBP10.46□□□□□ -0.73
SEC13-214ENST00000476597 ACTR10Q9NZ32 417 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 POLG2Q9UHN1 485 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 SERTAD3Q9UJW9 196 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 ICKQ9UPZ9 632 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 POLHQ9Y253 713 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 ASF1AQ9Y294 204 aa10.46□□□□□ -0.73
SEC13-214ENST00000476597 F8W8V4 182 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 MEN1O00255 615 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 MAP3K7O43318 606 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 GPC4O75487 556 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 KLK3P07288 261 aaPredicted RBP10.45□□□□□ -0.74
SEC13-214ENST00000476597 RORAP35398 523 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 KCNJ1P48048 391 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 NPY2RP49146 381 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 CSRP3P50461 194 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 PRAMEP78395 509 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 UGT8Q16880 541 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 ZNF789Q5FWF6 425 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 IZUMO3Q5VZ72 239 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 SPESP1Q6UW49 350 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 TMEM135Q86UB9 458 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 PPHLN1Q8NEY8 458 aaKnown RBP10.45□□□□□ -0.74
SEC13-214ENST00000476597 TRIM58Q8NG06 486 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 FLVCR1-AS1Q8TAF5 88 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 CPT1BQ92523 772 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 MR1Q95460 341 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 OR2A14Q96R47 310 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 AP1M1Q9BXS5 423 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 KLHL25Q9H0H3 589 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 CHST8Q9H2A9 424 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 ACTL8Q9H568 366 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 CLMPQ9H6B4 373 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 FANCEQ9HB96 536 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 PCMTD2Q9NV79 361 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 SPHK1Q9NYA1 384 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 OR6C2Q9NZP2 312 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 ANAPC5Q9UJX4 755 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 CDYLQ9Y232 598 aa10.45□□□□□ -0.74
SEC13-214ENST00000476597 SPENQ96T58 3664 aaKnown RBP10.45□□□□□ -0.74
SEC13-214ENST00000476597 TMEM150CB9EJG8 249 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 AP3B1O00203 1094 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms