RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NOSIPQ9Y314 301 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 ARL5AQ9Y689 179 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 IGLV3-10A0A075B6K4 115 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PRMT3O60678 531 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 TSPAN9O75954 239 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ALOX12P18054 663 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PSMB9P28065 219 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 GPR15P49685 360 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 GSK3BP49841 420 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 HK3P52790 923 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 SELPLGQ14242 412 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 INPP5AQ14642 412 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 FAM83EQ2M2I3 478 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 C6orf141Q5SZD1 244 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RAP1GAP2Q684P5 730 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 METTL4Q8N3J2 472 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 DYNC2LI1Q8TCX1 351 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 IGSF8Q969P0 613 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 TMBIM1Q969X1 311 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PYCR2Q96C36 320 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 LRRC58Q96CX6 371 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 TRIB3Q96RU7 358 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PDE10AQ9Y233 779 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 CRYL1Q9Y2S2 319 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 AQP12BA6NM10 295 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 DEAF1O75398 565 aaPredicted RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 PRSS23O95084 383 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 KRT8P05787 483 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RBP1P09455 135 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ETV3P41162 512 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 MASP1P48740 699 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 MLLT6P55198 1093 aaPredicted RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 PPP2R2BQ00005 443 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 CDC42EP1Q00587 391 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ILF2Q12905 390 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 MADCAM1Q13477 382 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RCAN2Q14206 197 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 NKG7Q16617 165 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 CDONQ4KMG0 1287 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ARMC4Q5T2S8 1044 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PXDC1Q5TGL8 231 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 TLK2Q86UE8 772 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 AQP12AQ8IXF9 295 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 EXT2Q93063 718 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PSMG2Q969U7 264 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 MED30Q96HR3 178 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 FYTTD1Q96QD9 318 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 KCTD14Q9BQ13 255 aaPredicted RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 ACBD6Q9BR61 282 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ACTR3BQ9P1U1 418 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RIMKLBQ9ULI2 386 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 U3KQV3 271 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 hCG_2039718K7EN88 272 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 KLK8O60259 260 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 FADS2O95864 444 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 LDLRP01130 860 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 CYP4B1P13584 511 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 ITIH1P19827 911 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 SERPINH1P50454 418 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 OR4D2P58180 307 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 FKBP1BP68106 108 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 SYT16Q17RD7 645 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 GALNT12Q8IXK2 581 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 C2orf69Q8N8R5 385 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 GPR150Q8NGU9 434 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 BPIFB1Q8TDL5 484 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 HASPINQ8TF76 798 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 CNDP2Q96KP4 475 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 BTN2A3PQ96KV6 586 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 TBATAQ96M53 351 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 RBM14Q96PK6 669 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 MBOAT4Q96T53 435 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 REXO4Q9GZR2 422 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 NARFLQ9H6Q4 476 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 PDFQ9HBH1 243 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 INTS7Q9NVH2 962 aaKnown RBP8.23□□□□□ -1.09
VAPB-205ENST00000476395 ST3GAL5Q9UNP4 418 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 BTRCQ9Y297 605 aa8.23□□□□□ -1.09
VAPB-205ENST00000476395 A0A1W2PQH9 124 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 A6NCN8 305 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 STMND1H3BQB6 276 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 FGF10O15520 208 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 SUPT7LO94864 414 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GABARAPO95166 117 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 GOT2P00505 430 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 ALPLP05186 524 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 LINC00032P0C843 101 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 BTF3P20290 206 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 CD9P21926 228 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 SLC26A3P40879 764 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 CDKN1CP49918 316 aaPredicted RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 AGTR2P50052 363 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 PURAQ00577 322 aaKnown RBP8.22□□□□□ -1.09
VAPB-205ENST00000476395 PTCHD3Q3KNS1 767 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 MS4A13Q5J8X5 152 aa8.22□□□□□ -1.09
VAPB-205ENST00000476395 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms