RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CEACAM4O75871 244 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 STK10O94804 968 aaKnown RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 AP2A1O95782 977 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 RALBP11234 206 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ETS1P14921 441 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 CDH3P22223 829 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 NDUFS1P28331 727 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 FOXN2P32314 431 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 HADHAP40939 763 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 PTGIRP43119 386 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 UQCRFS1P47985 274 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 LMAN1P49257 510 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 CCL11P51671 97 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 FOXL2P58012 376 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 CACNG1Q06432 222 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 RPA4Q13156 261 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 SEMA3AQ14563 771 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 PTCHD3Q3KNS1 767 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 PAPD7Q5XG87 772 aaKnown RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 FAM198BQ6UWH4 519 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 PEX26Q7Z412 305 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 TRIM73Q86UV7 250 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ZBTB2Q8N680 514 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ENDOVQ8N8Q3 282 aaKnown RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 LMNTD1Q8N9Z9 388 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 GLIS1Q8NBF1 620 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 OR52K1Q8NGK4 314 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 OR8K5Q8NH50 307 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 THAP4Q8WY91 577 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 TFGQ92734 400 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 PSMG3-AS1Q96PY0 264 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 OR2A14Q96R47 310 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 BAG1Q99933 345 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 DESI2Q9BSY9 194 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 NLNQ9BYT8 704 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 SPRTNQ9H040 489 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 MVB12BQ9H7P6 319 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 LRRC40Q9H9A6 602 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ETNK1Q9HBU6 452 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 SOHLH2Q9NX45 425 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ACTR10Q9NZ32 417 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 SMARCAL1Q9NZC9 954 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 ANKMY1Q9P2S6 941 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 AMFRQ9UKV5 643 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 TCFL5Q9UL49 500 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 MAN2B2Q9Y2E5 1009 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 BOLA1Q9Y3E2 137 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 USP9XQ93008 2570 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-207ENST00000475549 NBASA2RRP1 2371 aa6.8□□□□□ -1.32
HDAC3-207ENST00000475549 CFAP99D6REC4 459 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 MASP2O00187 686 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 MATN2O00339 956 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 IFRD1O00458 451 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 ZNF749O43361 778 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 CNOT3O75175 753 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 SORBS2O94875 1100 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 SUN1O94901 812 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 AP2A2O94973 939 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 KLK3P07288 261 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 RAB40ALP0C0E4 278 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 UGT2B7P16662 529 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 MSNP26038 577 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PEBP1P30086 187 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 RPS15P62841 145 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 ACVR1Q04771 509 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PRKAA1Q13131 559 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 GRB7Q14451 532 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 KRT33BQ14525 404 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 BRD3Q15059 726 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 OASLQ15646 514 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 TMTC4Q5T4D3 741 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 CYB5D1Q6P9G0 228 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 SPESP1Q6UW49 350 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PACS1Q6VY07 963 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 ZNF534Q76KX8 674 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 LDB1Q86U70 411 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 VRK3Q8IV63 474 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 FAM20CQ8IXL6 584 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 SYTL1Q8IYJ3 562 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 TEX19Q8NA77 164 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 Q8NA96 180 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 FDCSPQ8NFU4 85 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 STYXQ8WUJ0 223 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 HDAC10Q969S8 669 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 FERMT1Q9BQL6 677 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 HGH1Q9BTY7 390 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 ACTR5Q9H9F9 607 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 SLC22A11Q9NSA0 550 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PLAGL1Q9UM63 463 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 CDYLQ9Y232 598 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PCDHGA9Q9Y5G4 932 aaKnown RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 HEBP2Q9Y5Z4 205 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms