RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 RHBDD2Q6NTF9 364 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 ZNF449Q6P9G9 518 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 CDHR3Q6ZTQ4 885 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 SNX20Q7Z614 316 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 GPR135Q8IZ08 494 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 RCOR2Q8IZ40 523 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 ADGRF3Q8IZF5 1079 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 CLEC1AQ8NC01 280 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 OR52E1Q8NGJ3 308 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.26■□□□□ 0.354e-7■■■■■ 35.7
PCGF3-209ENST00000475288 RBM41Q96IZ5 413 aaKnown RBP17.26■□□□□ 0.35
PCGF3-209ENST00000475288 PPP1R2P1Q96PQ5 205 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 FERMT1Q9BQL6 677 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 FEZ2Q9UHY8 353 aaPredicted RBP17.26■□□□□ 0.35
PCGF3-209ENST00000475288 SLC5A6Q9Y289 635 aa17.26■□□□□ 0.35
PCGF3-209ENST00000475288 TRBV5-4A0A0C4DH59 114 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 APOC4-APOC2K7ER74 178 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 CLDN1O95832 211 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 APOC2P02655 101 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 NR6A1Q15406 480 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ZRANB3Q5FWF4 1079 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 SPESP1Q6UW49 350 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 BBS12Q6ZW61 710 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 NAT14Q8WUY8 206 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 TM9SF4Q92544 642 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 NACC2Q96BF6 587 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 TCTN2Q96GX1 697 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 GBP5Q96PP8 586 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ARNT2Q9HBZ2 717 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ASF1BQ9NVP2 202 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ZDHHC3Q9NYG2 299 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ACTR10Q9NZ32 417 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 MAP10Q9P2G4 905 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 ALG6Q9Y672 507 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 PCM1Q15154 2024 aa17.25■□□□□ 0.35
PCGF3-209ENST00000475288 FER1L5A0AVI2 2057 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 CREBBPQ92793 2442 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 H7C0S8 307 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 DDX3YO15523 660 aaKnown RBP17.24■□□□□ 0.35
PCGF3-209ENST00000475288 CBFA2T2O43439 604 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 TPM1P09493 284 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 RBL1P28749 1068 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 OTX2P32243 289 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 DCTP40126 519 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 TICAM1Q8IUC6 712 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 KLHDC8BQ8IXV7 354 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 GALNT16Q8N428 558 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 C19orf47Q8N9M1 422 aaKnown RBP17.24■□□□□ 0.35
PCGF3-209ENST00000475288 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 OR2Y1Q8NGV0 311 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 TFGQ92734 400 aaPredicted RBP17.24■□□□□ 0.35
PCGF3-209ENST00000475288 C19orf60Q96EN9 201 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 C5orf34Q96MH7 638 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 ZNF552Q9H707 407 aaPredicted RBP17.24■□□□□ 0.35
PCGF3-209ENST00000475288 SRPK3Q9UPE1 567 aa17.24■□□□□ 0.35
PCGF3-209ENST00000475288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCGF3-209ENST00000475288 ANKUB1A6NFN9 424 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 PEX12O00623 359 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 KRT86O43790 486 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 MFAP3LO75121 409 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 OR2B3O76000 313 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 PVRP15151 417 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 ACRV1P26436 265 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 SHMT2P34897 504 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 FOLR3P41439 243 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 GABRA4P48169 554 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 COPS2P61201 443 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 PRPSAP1Q14558 356 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 Q6ZS92 163 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 HAUS1Q96CS2 278 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 AP1M1Q9BXS5 423 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 GPN3Q9UHW5 284 aaPredicted RBP17.23■□□□□ 0.35
PCGF3-209ENST00000475288 EFR3BQ9Y2G0 817 aa17.23■□□□□ 0.35
PCGF3-209ENST00000475288 NUP210LQ5VU65 1888 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 PIKFYVEQ9Y2I7 2098 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 LDB2O43679 373 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 ZNF189O75820 626 aaPredicted RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 CBSLP0DN79 551 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 PTMSP20962 102 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 PDHA2P29803 388 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 CBSP35520 551 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 DCDP81605 110 aaKnown RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 RAPSNQ13702 412 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 ZNF787Q6DD87 383 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 DENND5AQ6IQ26 1287 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 MRPL14Q6P1L8 145 aaKnown RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 TLDC1Q6P9B6 456 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 HOOK3Q86VS8 718 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 CISD2Q8N5K1 135 aaKnown RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 TTC13Q8NBP0 860 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 N4BP2L2Q92802 583 aaPredicted RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 PTERQ96BW5 349 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 ILKAPQ9H0C8 392 aaPredicted RBP17.22■□□□□ 0.35
PCGF3-209ENST00000475288 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 P4HTMQ9NXG6 502 aa17.22■□□□□ 0.35
PCGF3-209ENST00000475288 NDOR1Q9UHB4 597 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms