RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SRP72O76094 671 aaKnown RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 KRT1P04264 644 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 CBSLP0DN79 551 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 NFKB1P19838 968 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 CA5AP35218 305 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 CBSP35520 551 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 PRLHRP49683 370 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 DYNLT1P63172 113 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 TFDP2Q14188 446 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 MESDQ14696 234 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 AGAP7PQ5VUJ5 663 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 SP5Q6BEB4 398 aaPredicted RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 SPESP1Q6UW49 350 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 NPNTQ6UXI9 565 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 C19orf47Q8N9M1 422 aaKnown RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 DENND1AQ8TEH3 1009 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 FAR1Q8WVX9 515 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 MRGPRX2Q96LB1 330 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 AGAP4Q96P64 663 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 FCRL5Q96RD9 977 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 EPS8L2Q9H6S3 715 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 DDX56Q9NY93 547 aaKnown RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 NTNG1Q9Y2I2 539 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 LUC7L2Q9Y383 392 aaKnown RBP12.18□□□□□ -0.46
SKA3-206ENST00000475251 PCSK5Q92824 1860 aa12.18□□□□□ -0.46
SKA3-206ENST00000475251 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 BUD23O43709 281 aaKnown RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 MBD3O95983 291 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 CD68P34810 354 aaPredicted RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 CHRNA4P43681 627 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 CDC16Q13042 620 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 RPA4Q13156 261 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 ZNF169Q14929 603 aaPredicted RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 TLR1Q15399 786 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 TAF1AQ15573 450 aaPredicted RBP12.17□□□□□ -0.46
SKA3-206ENST00000475251 FAM182AQ5T1J6 154 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 C1orf189Q5VU69 101 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 PRAMEF13Q5VWM6 474 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 FAM180AQ6UWF9 173 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 PPP1R32Q7Z5V6 425 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 DAAM2Q86T65 1068 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 DNAJB14Q8TBM8 379 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 GRHL3Q8TE85 626 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 CPLX3Q8WVH0 158 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 COPS8Q99627 209 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 KLHL25Q9H0H3 589 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 DEF6Q9H4E7 631 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 IRAK4Q9NWZ3 460 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 CAPN11Q9UMQ6 739 aa12.17□□□□□ -0.46
SKA3-206ENST00000475251 E2F3O00716 465 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 KDM1AO60341 852 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 ZG16O60844 167 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 STSP08842 583 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 GSTM1P09488 218 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 TMEM253P0C7T8 217 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 PIM1P11309 404 aaPredicted RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 PRF1P14222 555 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 PVRP15151 417 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 ITGALP20701 1170 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 MMP11P24347 488 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 SHMT2P34897 504 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 TPM4P67936 248 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 GSTM4Q03013 218 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 WASHC5Q12768 1159 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 ZXDCQ2QGD7 858 aaPredicted RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 IGFL2Q6UWQ7 119 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 OR4K2Q8NGD2 314 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 DLG3Q92796 817 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 FKBP10Q96AY3 582 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 CNDP1Q96KN2 507 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 UNKQ9C0B0 810 aaKnown RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 MRM3Q9HC36 420 aaKnown RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 ZBTB20Q9HC78 741 aaPredicted RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 COPG2Q9UBF2 871 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 RSPH14Q9UHP6 348 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 TRHDEQ9UKU6 1024 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 KLF2Q9Y5W3 355 aaPredicted RBP12.16□□□□□ -0.46
SKA3-206ENST00000475251 ARL5AQ9Y689 179 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 PCM1Q15154 2024 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 CROCCQ5TZA2 2017 aa12.16□□□□□ -0.46
SKA3-206ENST00000475251 SPTBP11277 2137 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms