RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CASKIN2Q8WXE0 1202 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 KLHL6Q8WZ60 621 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 HAS1Q92839 578 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 DVL3Q92997 716 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ECSITQ9BQ95 431 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SPXQ9BT56 116 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 COPS4Q9BT78 406 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RBCK1Q9BYM8 510 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ILKAPQ9H0C8 392 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ZFP14Q9HCL3 533 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CD209Q9NNX6 404 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PKD2L2Q9NZM6 624 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SORCS3Q9UPU3 1222 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 AAR2Q9Y312 384 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 A0A1W2PQ72 361 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RHPN2P1A8MT19 583 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SUV39H1O43463 412 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 NUDT21O43809 227 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 C8BP07358 591 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ACVR2AP27037 513 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PRDX6P30041 224 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ERVK-9P63128 1117 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 DYNLL1P63167 89 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ACVR2BQ13705 512 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 GPAT3Q53EU6 434 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ANGEL2Q5VTE6 544 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ATG9BQ674R7 924 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 MICU2Q8IYU8 434 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CHTF18Q8WVB6 975 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RFFLQ8WZ73 363 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 OMA1Q96E52 524 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SLC41A2Q96JW4 573 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TAAR1Q96RJ0 339 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RTKNQ9BST9 563 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 BTBD1Q9H0C5 482 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 NANSQ9NR45 359 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 P4HTMQ9NXG6 502 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TMEM59LQ9UK28 342 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF646O15015 1829 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 FOCADQ5VW36 1801 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TEX13CA0A0J9YWL9 993 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 C2orf71A6NGG8 1288 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ANKDD1BA6NHY2 528 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 GPR32O75388 356 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RHBDL1O75783 438 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RGS9O75916 674 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 AHSGP02765 367 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CBSLP0DN79 551 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 DARSP14868 501 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 IGFBP5P24593 272 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CBSP35520 551 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PREPP48147 710 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 KCNMA1Q12791 1236 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CD300LGQ6UXG3 332 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF813Q6ZN06 617 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 EFL1Q7Z2Z2 1120 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 RNF113BQ8IZP6 322 aaKnown RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 KCTD6Q8NC69 237 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 ST6GAL2Q96JF0 529 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 PTDSS2Q9BVG9 487 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SLC22A4Q9H015 551 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 WWP1Q9H0M0 922 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TTYH1Q9H313 450 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-206ENST00000474871 GPAMQ9HCL2 828 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TXLNGQ9NUQ3 528 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 SMOXQ9NWM0 555 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 IL20RAQ9UHF4 553 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 CDY1Q9Y6F8 540 aa4.79□□□□□ -1.64
NPHP3-206ENST00000474871 TCP10L2B9ZVM9 353 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MRPS14O60783 128 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF780AO75290 641 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TNNC2P02585 160 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 OR2T7P0C7T2 308 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MAPTP10636 758 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 RAB4AP20338 218 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PRDX5P30044 214 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GRIA3P42263 894 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GATA4P43694 442 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PPP3CCP48454 512 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CXCR4P61073 352 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TNFRSF17Q02223 184 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GAGE1Q13065 139 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 KLF10Q13118 480 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MADCAM1Q13477 382 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SURF1Q15526 300 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ANKRD26P1Q6NSI1 321 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CFAP77Q6ZQR2 320 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 NDUFAF7Q7L592 441 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TBC1D16Q8TBP0 767 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TLCD1Q96CP7 247 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms