RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 DCAF10Q5QP82 559 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 LDLRAP1Q5SW96 308 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 PPP1R32Q7Z5V6 425 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 MAP7D3Q8IWC1 876 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 CFAP206Q8IYR0 622 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 ADGRF3Q8IZF5 1079 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 PHC3Q8NDX5 983 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 OR2L2Q8NH16 312 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 GRHL3Q8TE85 626 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 SYN2Q92777 582 aaPredicted RBP9.02□□□□□ -0.97
VCL-204ENST00000472585 LINC00615Q96LM1 132 aaPredicted RBP9.02□□□□□ -0.97
VCL-204ENST00000472585 MESP1Q9BRJ9 268 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 XPO4Q9C0E2 1151 aaKnown RBP9.02□□□□□ -0.97
VCL-204ENST00000472585 SLC7A5P2Q9GIP4 190 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 XKR8Q9H6D3 395 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 FANCEQ9HB96 536 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 C1GALT1Q9NS00 363 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 SLC22A11Q9NSA0 550 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 CTTNBP2NLQ9P2B4 639 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 SUCOQ9UBS9 1254 aaKnown RBP9.02□□□□□ -0.97
VCL-204ENST00000472585 PADI2Q9Y2J8 665 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 ARL5AQ9Y689 179 aa9.02□□□□□ -0.97
VCL-204ENST00000472585 A0A0A6YYK5 440 aaPredicted RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 A0A1W2PQJ5 194 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CCDC78A2IDD5 438 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 LRRD1A4D1F6 860 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 AGAP14A8MT82 685 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 C9J4A7 227 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 ALOX12BO75342 701 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 NADKO95544 446 aaPredicted RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 AGTP01019 485 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 HLA-DPA1P20036 260 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 ITGAXP20702 1163 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CAPN3P20807 821 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 SSTR2P30874 369 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CDKN1CP49918 316 aaPredicted RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 SOX8P57073 446 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 DYNLT1P63172 113 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 SSPNQ14714 243 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 PDK1Q15118 436 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 SLC1A5Q15758 541 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 PPP2R5EQ16537 467 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 HIF1AQ16665 826 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 ASTE1Q2TB18 679 aaPredicted RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 BCL7AQ4VC05 210 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 ZFYVE27Q5T4F4 411 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 C1orf189Q5VU69 101 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 MLIPQ5VWP3 458 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 MRPL14Q6P1L8 145 aaKnown RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CARFQ8N187 725 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 AMER2Q8N7J2 671 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 OR52E1Q8NGJ3 308 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 FLVCR1-AS1Q8TAF5 88 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 BLOC1S5Q8TDH9 187 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 FAR1Q8WVX9 515 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 GBP5Q96PP8 586 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 WDR77Q9BQA1 342 aaPredicted RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 OR52A5Q9H2C5 316 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 HAUS2Q9NVX0 235 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 SMOXQ9NWM0 555 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 P4HTMQ9NXG6 502 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 FAM153AQ9UHL3 310 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 ACSL5Q9ULC5 683 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CAPN11Q9UMQ6 739 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 CDYLQ9Y232 598 aa9.01□□□□□ -0.97
VCL-204ENST00000472585 PTRH2Q9Y3E5 179 aaKnown RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 BZW2Q9Y6E2 419 aaKnown RBP9.01□□□□□ -0.97
VCL-204ENST00000472585 DOCK10Q96BY6 2186 aa9□□□□□ -0.97
VCL-204ENST00000472585 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
VCL-204ENST00000472585 ANKRD12Q6UB98 2062 aa9□□□□□ -0.97
VCL-204ENST00000472585 ZNF487B1APH4 448 aa9□□□□□ -0.97
VCL-204ENST00000472585 APOL1O14791 398 aa9□□□□□ -0.97
VCL-204ENST00000472585 S1PR4O95977 384 aa9□□□□□ -0.97
VCL-204ENST00000472585 EPOP01588 193 aa9□□□□□ -0.97
VCL-204ENST00000472585 PRSS56P0CW18 603 aa9□□□□□ -0.97
VCL-204ENST00000472585 MSH3P20585 1137 aa9□□□□□ -0.97
VCL-204ENST00000472585 CYP2A7P20853 494 aa9□□□□□ -0.97
VCL-204ENST00000472585 AGXTP21549 392 aa9□□□□□ -0.97
VCL-204ENST00000472585 CDC16Q13042 620 aa9□□□□□ -0.97
VCL-204ENST00000472585 MESDQ14696 234 aa9□□□□□ -0.97
VCL-204ENST00000472585 SLC9A5Q14940 896 aa9□□□□□ -0.97
VCL-204ENST00000472585 TESK1Q15569 626 aa9□□□□□ -0.97
VCL-204ENST00000472585 TAZQ16635 292 aa9□□□□□ -0.97
VCL-204ENST00000472585 DEFB110Q30KQ9 67 aa9□□□□□ -0.97
VCL-204ENST00000472585 ARMC6Q6NXE6 501 aa9□□□□□ -0.97
VCL-204ENST00000472585 FAM180AQ6UWF9 173 aa9□□□□□ -0.97
VCL-204ENST00000472585 MFSD7Q6UXD7 560 aa9□□□□□ -0.97
VCL-204ENST00000472585 BNC2Q6ZN30 1099 aaPredicted RBP9□□□□□ -0.97
VCL-204ENST00000472585 CDH24Q86UP0 819 aa9□□□□□ -0.97
VCL-204ENST00000472585 ZNF567Q8N184 647 aa9□□□□□ -0.97
VCL-204ENST00000472585 DNAJB14Q8TBM8 379 aa9□□□□□ -0.97
VCL-204ENST00000472585 COG1Q8WTW3 980 aa9□□□□□ -0.97
VCL-204ENST00000472585 LCN9Q8WX39 176 aa9□□□□□ -0.97
VCL-204ENST00000472585 BPIFA3Q9BQP9 254 aa9□□□□□ -0.97
VCL-204ENST00000472585 SRMSQ9H3Y6 488 aa9□□□□□ -0.97
VCL-204ENST00000472585 TRABDQ9H4I3 376 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms