RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TUBB2AQ13885 445 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 BOP1Q14137 746 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 SIX1Q15475 284 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 OASLQ15646 514 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 CCSMST1Q4G0I0 132 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 LACTB2Q53H82 288 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 C1orf189Q5VU69 101 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ZDHHC20Q5W0Z9 365 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ZNF517Q6ZMY9 492 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 UNC5AQ6ZN44 842 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ARHGEF18Q6ZSZ5 1173 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ASB18Q6ZVZ8 466 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 PEX26Q7Z412 305 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SHISA5Q8N114 240 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ZBTB2Q8N680 514 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ENDOVQ8N8Q3 282 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 ADAMTS17Q8TE56 1095 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 UBXN4Q92575 508 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 TFGQ92734 400 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 HDAC10Q969S8 669 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 COL26A1Q96A83 441 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 DCUN1D1Q96GG9 259 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 HES6Q96HZ4 224 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 CATSPER2Q96P56 530 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 IL17FQ96PD4 163 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 OR2A14Q96R47 310 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 BAG1Q99933 345 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 TUBB2BQ9BVA1 445 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SRMSQ9H3Y6 488 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 PDE7BQ9NP56 450 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 PCMTD2Q9NV79 361 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 MARCH4Q9P2E8 410 aaPredicted RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 FARSAQ9Y285 508 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 BTRCQ9Y297 605 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 AAR2Q9Y312 384 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP48-207ENST00000471752 SLC5A10A0PJK1 596 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CLEC18AA5D8T8 446 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 MEN1O00255 615 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ZBTB11O95625 1053 aaPredicted RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 CRTAMO95727 393 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 AP2A1O95782 977 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 SFTPCP11686 197 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 UGT2B7P16662 529 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ITGALP20701 1170 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ITGAXP20702 1163 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CDH3P22223 829 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 PSMA3P25788 255 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CCR7P32248 378 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 GRIA3P42263 894 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ARL4DP49703 201 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 TERF1P54274 439 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP48-207ENST00000471752 GRB7Q14451 532 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 KRT33BQ14525 404 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 PRPSAP1Q14558 356 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 SLC9A5Q14940 896 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CRTC2Q53ET0 693 aaPredicted RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 ZNF385CQ66K41 422 aaPredicted RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 FAM198BQ6UWH4 519 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CES3Q6UWW8 571 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CLEC18BQ6UXF7 455 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 KIAA1328Q86T90 577 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 OOSP2Q86WS3 158 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 TMEM126BQ8IUX1 230 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 DSELQ8IZU8 1212 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 KRT222Q8N1A0 295 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 CLEC18CQ8NCF0 446 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 HM13Q8TCT9 377 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 MIB2Q96AX9 1013 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 C19orf60Q96EN9 201 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 PITPNM3Q9BZ71 974 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 TFB2MQ9H5Q4 396 aaKnown RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 SLC22A11Q9NSA0 550 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 SOHLH2Q9NX45 425 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 STOX2Q9P2F5 926 aaPredicted RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 GALPQ9UBC7 116 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 TUBD1Q9UJT1 453 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 RUVBL2Q9Y230 463 aaKnown RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 CDYLQ9Y232 598 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 POLHQ9Y253 713 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 MAN2B2Q9Y2E5 1009 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 TDRKHQ9Y2W6 561 aaKnown RBP7.82□□□□□ -1.16
USP48-207ENST00000471752 TACC2O95359 2948 aa7.82□□□□□ -1.16
USP48-207ENST00000471752 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 ICE1Q9Y2F5 2266 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 C17orf113A0A1B0GUU1 675 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 TCRBV7S3A2A0A539 114 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 H7C0S8 307 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ZNF185O15231 689 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ZNF749O43361 778 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 LIASO43766 372 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 ALOX12BO75342 701 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 RFPL1O75677 317 aa7.81□□□□□ -1.16
USP48-207ENST00000471752 KLF7O75840 302 aaPredicted RBP7.81□□□□□ -1.16
USP48-207ENST00000471752 MED26O95402 600 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms