RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 MRGPRX3Q96LB0 322 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 ZNF597Q96LX8 424 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 PHOX2BQ99453 314 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 TCF25Q9BQ70 676 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 C1orf50Q9BV19 199 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 NTMT1Q9BV86 223 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 EMILIN2Q9BXX0 1053 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 CD244Q9BZW8 370 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 BRD9Q9H8M2 597 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 IPPKQ9H8X2 491 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 PFDN4Q9NQP4 134 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 SMOXQ9NWM0 555 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 GID8Q9NWU2 228 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 KCTD5Q9NXV2 234 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 MARK1Q9P0L2 795 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 ACTR3BQ9P1U1 418 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 PDP2Q9P2J9 529 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 NFKBIL1Q9UBC1 381 aaPredicted RBP6.29□□□□□ -1.4
SPEN-204ENST00000471538 B4GALT6Q9UBX8 382 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 TRPS1Q9UHF7 1281 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 SLCO3A1Q9UIG8 710 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 MBD1Q9UIS9 605 aaPredicted RBP6.29□□□□□ -1.4
SPEN-204ENST00000471538 MSRAQ9UJ68 235 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 SLC25A13Q9UJS0 675 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 LEF1Q9UJU2 399 aaPredicted RBP6.29□□□□□ -1.4
SPEN-204ENST00000471538 CNOT6Q9ULM6 557 aaKnown RBP6.29□□□□□ -1.4
SPEN-204ENST00000471538 RWDD3Q9Y3V2 267 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 INSL6Q9Y581 213 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 AP4S1Q9Y587 144 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 MTCH2Q9Y6C9 303 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 DOCK6Q96HP0 2047 aa6.29□□□□□ -1.4
SPEN-204ENST00000471538 MUC22E2RYF6 1773 aaPredicted RBP6.29□□□□□ -1.4
SPEN-204ENST00000471538 ZFHX2Q9C0A1 2572 aaPredicted RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 KCNE1BA0A087WTH5 132 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TCRBV5S2A0A599 114 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 DYTNA2CJ06 578 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 C7orf72A4D263 438 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 CCDC154A6NI56 674 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ZNF839A8K0R7 811 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 A8MX80 341 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 NEDD8-MDP1E9PL57 170 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 K7EPI3 171 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ARNTLO00327 626 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 GIPC1O14908 333 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 SGTAO43765 313 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 NUAK1O60285 661 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 SYNCRIPO60506 623 aaKnown RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 RFPL2O75678 378 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 RSL1D1O76021 490 aaKnown RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 GUCA1CO95843 209 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 NPPAP01160 153 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 S100BP04271 92 aaPredicted RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 RHOP08100 348 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 EBLN1P0CF75 366 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ZCCHC18P0CG32 403 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 SMIM18P0DKX4 95 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 G6PDP11413 515 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 BMP2P12643 396 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TYRP14679 529 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 JAK1P23458 1154 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 AOAHP28039 575 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 CA8P35219 290 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 BMPR1AP36894 532 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 GRIA2P42262 883 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 SLC6A12P48065 614 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 GSK3BP49841 420 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 MMP16P51512 607 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 EEFSECP57772 596 aaKnown RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 KCNK10P57789 538 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 DCDC1P59894 354 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 NFYCQ13952 458 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ABRAXAS2Q15018 415 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ZXDCQ2QGD7 858 aaPredicted RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 TTLL9Q3SXZ7 439 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ATP6AP1LQ52LC2 224 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 PLPP4Q5VZY2 271 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TTC23LQ6PF05 361 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 IL27RAQ6UWB1 636 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 DLEU7Q6UYE1 221 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 CYP2R1Q6VVX0 501 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 GDPD4Q6W3E5 623 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 PRR23BQ6ZRT6 265 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 Q6ZVU0 165 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ERMP1Q7Z2K6 904 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TRIM46Q7Z4K8 759 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 MILR1Q7Z6M3 343 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 DHFR2Q86XF0 187 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 NPAS3Q8IXF0 933 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 KIAA2013Q8IYS2 634 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ADGRG5Q8IZF4 528 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 ZNF557Q8N988 423 aaPredicted RBP6.28□□□□□ -1.4
SPEN-204ENST00000471538 FNDC5Q8NAU1 212 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TTC16Q8NEE8 873 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 METTL6Q8TCB7 284 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 SPPL3Q8TCT6 385 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 PBXIP1Q96AQ6 731 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
SPEN-204ENST00000471538 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms