RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 FERP16591 822 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MMP11P24347 488 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CCNCP24863 283 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 NDUFS1P28331 727 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 PCK1P35558 622 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 SPAM1P38567 509 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ST13P50502 369 aaKnown RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CSNK1G2P78368 415 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ADORA2A-AS1P86434 159 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GBE1Q04446 702 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GALNT2Q10471 571 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ZBTB17Q13105 803 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MFAP5Q13361 173 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 KRT31Q15323 416 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CDSNQ15517 529 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 C3AR1Q16581 482 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CT47A1Q5JQC4 288 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GPRC6AQ5T6X5 926 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 METRNLQ641Q3 311 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF385CQ66K41 422 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 NCBP2-AS2Q69YL0 99 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 PLEKHA7Q6IQ23 1121 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 RHBDD2Q6NTF9 364 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GLT6D1Q7Z4J2 308 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 AMIGO1Q86WK6 493 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 LRRC49Q8IUZ0 686 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 FAM20CQ8IXL6 584 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CARFQ8N187 725 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 TAB3Q8N5C8 712 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 LILRA3Q8N6C8 439 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ACVR1CQ8NER5 493 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 OR52E1Q8NGJ3 308 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 SPATA22Q8NHS9 363 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 PROKR1Q8TCW9 393 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CA5BP1Q8WTZ4 195 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 NRGNQ92686 78 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 C8orf44Q96CB5 159 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 DCUN1D1Q96GG9 259 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 VPS50Q96JG6 964 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 VPS35Q96QK1 796 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 PCNX1Q96RV3 2341 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MAGEE1Q9HCI5 957 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GPAMQ9HCL2 828 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MRPL47Q9HD33 250 aaKnown RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 FAM60AQ9NP50 221 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ACSL5Q9ULC5 683 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 TDRKHQ9Y2W6 561 aaKnown RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 HEBP2Q9Y5Z4 205 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MAU2Q9Y6X3 613 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MTORP42345 2549 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 NAV3Q8IVL0 2385 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 C17orf113A0A1B0GUU1 675 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ISM1B1AKI9 464 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 SOCS6O14544 535 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 MAP2K7O14733 419 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 WFS1O76024 890 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 PYGMP11217 842 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 PIM1P11309 404 aaPredicted RBP6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ACPPP15309 386 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 MX2P20592 715 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
HDAC1-204ENST00000471488 MST1P26927 711 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 OR1D4P47884 311 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 TDGF1P3P51864 188 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 SOX8P57073 446 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 DMPKQ09013 629 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ITGA9Q13797 1035 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 PTPRCAPQ14761 206 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 BRD3Q15059 726 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 HADHQ16836 314 aaKnown RBP6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.353e-10■□□□□ 9.3
HDAC1-204ENST00000471488 ATP13A4Q4VNC1 1196 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 PPP1R2P3Q6NXS1 205 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF449Q6P9G9 518 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 SPESP1Q6UW49 350 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 KIRREL2Q6UWL6 708 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ARHGEF18Q6ZSZ5 1173 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 KBTBD2Q8IY47 623 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 OR2L2Q8NH16 312 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 BRIX1Q8TDN6 353 aaKnown RBP6.62□□□□□ -1.35
HDAC1-204ENST00000471488 MAML1Q92585 1016 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 DLG3Q92796 817 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 SDCCAG3Q96C92 435 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 MESP1Q9BRJ9 268 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 CRB3Q9BUF7 120 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 IL26Q9NPH9 171 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 CTSFQ9UBX1 484 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 AMACRQ9UHK6 382 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 ANAPC7Q9UJX3 599 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 KLHL20Q9Y2M5 609 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 LUC7L2Q9Y383 392 aaKnown RBP6.62□□□□□ -1.35
HDAC1-204ENST00000471488 PKP3Q9Y446 797 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 HS3ST3B1Q9Y662 390 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 POLEQ07864 2286 aa6.62□□□□□ -1.35
HDAC1-204ENST00000471488 NSG1A0A0A6YYJ2 146 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 NDST3O95803 873 aa6.61□□□□□ -1.35
HDAC1-204ENST00000471488 RALBP11234 206 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms