RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CSNK1EP49674 416 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 ABCE1P61221 599 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 HNRNPKP61978 463 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCM2-204ENST00000470837 CTBSQ01459 385 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 BST1Q10588 318 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 BIRC2Q13490 618 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 SIM2Q14190 667 aaPredicted RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 RCN2Q14257 317 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 FZD2Q14332 565 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 ANGPT1Q15389 498 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 UAP1L1Q3KQV9 507 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 PLK5Q496M5 336 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 METTL2BQ6P1Q9 378 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 SBSNQ6UWP8 590 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 FAM83HQ6ZRV2 1179 aaPredicted RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 ZCCHC23Q6ZST2 131 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 FAM47EQ6ZV65 393 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 GKN2Q86XP6 184 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 DCUN1D3Q8IWE4 304 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 TRIM48Q8IWZ4 208 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 TBC1D21Q8IYX1 336 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 TMEM151AQ8N4L1 468 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 ATP6V1E2Q96A05 226 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 RAD51AP1Q96B01 352 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 CXorf40BQ96DE9 158 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 FERD3LQ96RJ6 166 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 ILKAPQ9H0C8 392 aaPredicted RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 TMEM168Q9H0V1 697 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 EPN3Q9H201 632 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 OR52A5Q9H2C5 316 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 IMP3Q9NV31 184 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 OPTCQ9UBM4 332 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 SPASTQ9UBP0 616 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 POLG2Q9UHN1 485 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 ADAMTS6Q9UKP5 1117 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 RAB23Q9ULC3 237 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 PDE10AQ9Y233 779 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 TDRKHQ9Y2W6 561 aaKnown RBP9.53□□□□□ -0.88
CCM2-204ENST00000470837 PCDHGA2Q9Y5H1 932 aa9.53□□□□□ -0.88
CCM2-204ENST00000470837 A0A1W2PR77 199 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 OR5K4A6NMS3 321 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ARHGEF33A8MVX0 844 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 KATNA1O75449 491 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 STK16O75716 305 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 C1orf105O95561 183 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 FUCA1P04066 466 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 CSF2P04141 144 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 SBK3P0C264 359 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 SP9P0CG40 484 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ITPKAP23677 461 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 BDKRB1P46663 353 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 KCNC1P48547 511 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ARRB1P49407 418 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 NUBP1P53384 320 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 NXPH1P58417 271 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 EIF2B5Q13144 721 aaKnown RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 TSTA3Q13630 321 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 SETDB1Q15047 1291 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 TCEA2Q15560 299 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 RBBP7Q16576 425 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PHKG1Q16816 387 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PPP1R3AQ16821 1122 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ZNF658BQ4V348 819 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 ZNF542PQ5EBM4 170 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PRRT3Q5FWE3 981 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ZNF678Q5SXM1 525 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ZC3H14Q6PJT7 736 aaKnown RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 WASH2PQ6VEQ5 465 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 SYTL1Q8IYJ3 562 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 LRRC34Q8IZ02 419 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 MAML2Q8IZL2 1156 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 AVL9Q8NBF6 648 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PDPRQ8NCN5 879 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 FBXO15Q8NCQ5 510 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 OR9A1PQ8NGU1 263 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 OR5K2Q8NHB8 316 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 CEP76Q8TAP6 659 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PIGKQ92643 395 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 RHBDF1Q96CC6 855 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 FBXL8Q96CD0 374 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 L3HYPDHQ96EM0 354 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 C7orf26Q96N11 449 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 TMEM237Q96Q45 408 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 ORAI3Q9BRQ5 295 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 GATA5Q9BWX5 397 aaPredicted RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 RAB11FIP5Q9BXF6 653 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 DRC3Q9H069 523 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 STN1Q9H668 368 aaKnown RBP9.52□□□□□ -0.89
CCM2-204ENST00000470837 MVB12BQ9H7P6 319 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 WASH6PQ9NQA3 447 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 PRDM8Q9NQV8 689 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 GPR27Q9NS67 375 aa9.52□□□□□ -0.89
CCM2-204ENST00000470837 FGFR1OP2Q9NVK5 253 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms