RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	WDR78	Q5VTH9	848 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	ENOSF1	Q7L5Y1	443 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF554	Q86TJ5	538 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	TMEM173	Q86WV6	379 aa	Predicted RBP	4.94	□□□□□ -1.62
SSB-209	ENST00000470621	TRIML1	Q8N9V2	468 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	PAPD5	Q8NDF8	572 aa	Known RBP	4.94	□□□□□ -1.62
SSB-209	ENST00000470621	MCU	Q8NE86	351 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	HSD17B8	Q92506	261 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	SGK494	Q96LW2	274 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	GCNA	Q96QF7	691 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	LMF2	Q9BU23	707 aa	Known RBP	4.94	□□□□□ -1.62
SSB-209	ENST00000470621	GOLPH3L	Q9H4A5	285 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	ECHDC1	Q9NTX5	307 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	FBXO2	Q9UK22	296 aa	Predicted RBP	4.94	□□□□□ -1.62
SSB-209	ENST00000470621	RIPK3	Q9Y572	518 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	STK36	Q9NRP7	1315 aa		4.94	□□□□□ -1.62
SSB-209	ENST00000470621	LOC100509620	A0A075B734	347 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	HHLA1	C9JL84	531 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	GAPDHS	O14556	408 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB-209	ENST00000470621	STARD3NL	O95772	234 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	NNMT	P40261	264 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SSB-209	ENST00000470621	CX3CL1	P78423	397 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	IFI35	P80217	286 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB-209	ENST00000470621	PHLDA2	Q53GA4	152 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	BMP2KL	Q5H9B9	411 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.93	□□□□□ -1.62
SSB-209	ENST00000470621	DNAAF5	Q86Y56	855 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	ARHGAP24	Q8N264	748 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	KBTBD8	Q8NFY9	601 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	MOSPD2	Q8NHP6	518 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	TMEM190	Q8WZ59	177 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	TMEM143	Q96AN5	459 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	LRR1	Q96L50	414 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	MS4A10	Q96PG2	267 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621	S1PR5	Q9H228	398 aa		4.93	□□□□□ -1.62
SSB-209	ENST00000470621		A0A087X002	238 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	TMEM221	A6NGB7	291 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	PRR32	B1ATL7	298 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621		K7ENM7	598 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	WDPCP	O95876	746 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	CLPTM1	O96005	669 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	TPO	P07202	933 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	ITGA3	P26006	1051 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	CEACAM8	P31997	349 aa	Predicted RBP	4.92	□□□□□ -1.62
SSB-209	ENST00000470621	PPIG	Q13427	754 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
SSB-209	ENST00000470621	NR1D2	Q14995	579 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	P2RY6	Q15077	328 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	FFAR4	Q5NUL3	377 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	CEP85L	Q5SZL2	805 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	CFAP206	Q8IYR0	622 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	PTER	Q96BW5	349 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	BTBD10	Q9BSF8	475 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	LAT2	Q9GZY6	243 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	EQTN	Q9NQ60	294 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.92	□□□□□ -1.62
SSB-209	ENST00000470621	CPSF2	Q9P2I0	782 aa	Known RBP	4.92	□□□□□ -1.62
SSB-209	ENST00000470621	KCNK7	Q9Y2U2	307 aa		4.92	□□□□□ -1.62
SSB-209	ENST00000470621	SH2B2	O14492	632 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB-209	ENST00000470621	OR2T7	P0C7T2	308 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	CEACAM1	P13688	526 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	PTPN3	P26045	913 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	NKX2-1	P43699	371 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB-209	ENST00000470621	BECN1	Q14457	450 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	GTDC1	Q4AE62	458 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	C14orf177	Q52M58	125 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	BRINP3	Q76B58	766 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	ADGRA1	Q86SQ6	560 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	COMMD2	Q86X83	199 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	MAPKAPK5-AS1	Q8N8E1	139 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	OR10S1	Q8NGN2	331 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	CFAP61	Q8NHU2	1237 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	NXNL1	Q96CM4	212 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	PRAC1	Q96KF2	57 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	DGAT2	Q96PD7	388 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.91	□□□□□ -1.62
SSB-209	ENST00000470621	CENPO	Q9BU64	300 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	MRPL1	Q9BYD6	325 aa	Known RBP	4.91	□□□□□ -1.62
SSB-209	ENST00000470621		Q9N2K0	584 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	ZNF701	Q9NV72	531 aa	Predicted RBP	4.91	□□□□□ -1.62
SSB-209	ENST00000470621	GDE1	Q9NZC3	331 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	B3GAT1	Q9P2W7	334 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	GRIP1	Q9Y3R0	1128 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	FAM169A	Q9Y6X4	670 aa		4.91	□□□□□ -1.62
SSB-209	ENST00000470621	TRMU	O75648	421 aa	Known RBP	4.9	□□□□□ -1.63
SSB-209	ENST00000470621	CA4	P22748	312 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	MATR3	P43243	847 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
SSB-209	ENST00000470621	GPR17	Q13304	367 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	SNAPC1	Q16533	368 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	ARHGEF16	Q5VV41	709 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	GARNL3	Q5VVW2	1013 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF790	Q6PG37	636 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	C16orf54	Q6UWD8	224 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	SLC16A9	Q7RTY1	509 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	IRGQ	Q8WZA9	623 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	SPDL1	Q96EA4	605 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	PYGO1	Q9Y3Y4	419 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	DISP3	Q9P2K9	1392 aa		4.9	□□□□□ -1.63
SSB-209	ENST00000470621	IGHV4-61	A0A0C4DH41	118 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	LOC101059948	A0A1B0GTJ6	334 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms