RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 NRTNQ99748 197 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 MAK16Q9BXY0 300 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 XKR8Q9H6D3 395 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 ACTR10Q9NZ32 417 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 IL17CQ9P0M4 197 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 NUP210LQ5VU65 1888 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 PCM1Q15154 2024 aa18.32■□□□□ 0.52
NCKIPSD-209ENST00000470006 IFRD1O00458 451 aaPredicted RBP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 PPP1R12AO14974 1030 aaPredicted RBP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 CNOT3O75175 753 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 ALAS2P22557 587 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 TAS2R40P59535 323 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 OTUD4Q01804 1114 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 PDK1Q15118 436 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 SLC14A2Q15849 920 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 GFRALQ6UXV0 394 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 AMIGO1Q86WK6 493 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 TMEM151BQ8IW70 566 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 C19orf47Q8N9M1 422 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 PHC3Q8NDX5 983 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 TADA1Q96BN2 335 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 DCUN1D1Q96GG9 259 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 SLX1AQ9BQ83 275 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 NDC1Q9BTX1 674 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 FAM60AQ9NP50 221 aa18.31■□□□□ 0.52
NCKIPSD-209ENST00000470006 CCL21O00585 134 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 STX7O15400 261 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZSCAN9O15535 394 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 CYP1A2P05177 515 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 PRKG2Q13237 762 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 SIRPB2Q5JXA9 342 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 MRPL14Q6P1L8 145 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 SARM1Q6SZW1 724 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 IGFL2Q6UWQ7 119 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 BNC2Q6ZN30 1099 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 TRIM73Q86UV7 250 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 CATSPER1Q8NEC5 780 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 OR52E1Q8NGJ3 308 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 OR1N1Q8NGS0 311 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 THOC3Q96J01 351 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 LHPPQ9H008 270 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 ANO10Q9NW15 660 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 HACD3Q9P035 362 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 SH3BGRL2Q9UJC5 107 aa18.3■□□□□ 0.52
NCKIPSD-209ENST00000470006 DIAPH2O60879 1101 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 PRAMEF1O95521 474 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 RALBP11234 206 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 MMP11P24347 488 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 KDELR1P24390 212 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 WNT3AP56704 352 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZNF630Q2M218 657 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 TEX44Q53QW1 395 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 TLDC1Q6P9B6 456 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 SPESP1Q6UW49 350 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 TMEM207Q6UWW9 146 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 NPNTQ6UXI9 565 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZNF808Q8N4W9 903 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 PLD5Q8N7P1 536 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 HM13Q8TCT9 377 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 RAPGEF5Q92565 580 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 CCDC120Q96HB5 630 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 HGH1Q9BTY7 390 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 TFB2MQ9H5Q4 396 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 ASB8Q9H765 288 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 SMOXQ9NWM0 555 aa18.29■□□□□ 0.52
NCKIPSD-209ENST00000470006 LRRD1A4D1F6 860 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 APOL1O14791 398 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 CHRNA4P43681 627 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 ARG2P78540 354 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 PTPRCAPQ14761 206 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 KRTAP21-3Q3LHN1 58 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 FILIP1LQ4L180 1135 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 BCL7AQ4VC05 210 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 ZNF449Q6P9G9 518 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 ISLR2Q6UXK2 745 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 ADGRF3Q8IZF5 1079 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 CHMP5Q9NZZ3 219 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 CTTNBP2NLQ9P2B4 639 aa18.28■□□□□ 0.52
NCKIPSD-209ENST00000470006 PCNX1Q96RV3 2341 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 LOC285095A0A1B0GVY8 99 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 GAPDHSO14556 408 aaPredicted RBP18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 HCRTR1O43613 425 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 PROSCO94903 275 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 CTSBP07858 339 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 TUBB8Q3ZCM7 444 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 MTFR2Q6P444 385 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 SHISA6Q6ZSJ9 500 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 NACC2Q96BF6 587 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 VPS50Q96JG6 964 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 LINC00615Q96LM1 132 aaPredicted RBP18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 TRIM8Q9BZR9 551 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 MVB12BQ9H7P6 319 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 CRLS1Q9UJA2 301 aa18.27■□□□□ 0.52
NCKIPSD-209ENST00000470006 SOCS6O14544 535 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 PCDH17O14917 1159 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms