RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 UBL4BQ8N7F7 174 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 MRFAP1L1Q96HT8 127 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 NLNQ9BYT8 704 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 VPS37BQ9H9H4 285 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 SYTL2Q9HCH5 934 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 FAM60AQ9NP50 221 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 ACTR10Q9NZ32 417 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 TCFL5Q9UL49 500 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 CLEC18AA5D8T8 446 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 MROH6A6NGR9 719 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 A6NL46 340 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 E7EQ34 232 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF185O15231 689 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF749O43361 778 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF189O75820 626 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 AP2A2O94973 939 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 AP2A1O95782 977 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 TPBGLP0DKB5 382 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 NSG1P42857 185 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 CD97P48960 835 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 PGDP52209 483 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ITGA1P56199 1179 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 KLF1Q13351 362 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 CCDC38Q502W7 563 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 UNC5AQ6ZN44 842 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 TRIM73Q86UV7 250 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 CLEC18CQ8NCF0 446 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 OR52K1Q8NGK4 314 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 OR5AR1Q8NGP9 310 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 SLC35B2Q8TB61 432 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ADAMTS17Q8TE56 1095 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ELMO1Q92556 727 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 BAG1Q99933 345 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
CPSF4-210ENST00000469897 TDRKHQ9Y2W6 561 aaKnown RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 TLN1Q9Y490 2541 aaKnown RBP12.86□□□□□ -0.35
CPSF4-210ENST00000469897 CCDC162PA2VCL2 907 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 MIF4GDA9UHW6 222 aaKnown RBP12.85□□□□□ -0.35
CPSF4-210ENST00000469897 BHMG1C9JSJ3 638 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-210ENST00000469897 LIN7AO14910 233 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-210ENST00000469897 HCRTR1O43613 425 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 VPS4BO75351 444 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 TMEM63AO94886 807 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 GSTM1P09488 218 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 MSL3P1P0C860 447 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 PSMA3P25788 255 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
CPSF4-210ENST00000469897 ACADLP28330 430 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 GSTM4Q03013 218 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 ZIC1Q15915 447 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 MLIPQ5VWP3 458 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 SPESP1Q6UW49 350 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 HOOK3Q86VS8 718 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 SYTL1Q8IYJ3 562 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 FAM26EQ8N5C1 309 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 ZBTB2Q8N680 514 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 DNAAF3Q8N9W5 541 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 OR2A14Q96R47 310 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 SPHK1Q9NYA1 384 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 PCDHGA9Q9Y5G4 932 aaKnown RBP12.85□□□□□ -0.35
CPSF4-210ENST00000469897 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
CPSF4-210ENST00000469897 OR1I1O60431 355 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 FTH1P02794 183 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 CTSBP07858 339 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 CBSLP0DN79 551 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 UGT2B7P16662 529 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 AGXTP21549 392 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 GNLYP22749 145 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 STIP1P31948 543 aaKnown RBP12.84□□□□□ -0.35
CPSF4-210ENST00000469897 CBSP35520 551 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 GRIA1P42261 906 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 CSE1LP55060 971 aaKnown RBP12.84□□□□□ -0.35
CPSF4-210ENST00000469897 ITIH4Q14624 930 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 P3H1Q32P28 736 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 C1orf189Q5VU69 101 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
CPSF4-210ENST00000469897 FAM198BQ6UWH4 519 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 LINC00523Q86TU6 105 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 GPR135Q8IZ08 494 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 CPT1CQ8TCG5 803 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-210ENST00000469897 HDAC10Q969S8 669 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 TCTN2Q96GX1 697 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms