RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 LMNTD2Q8IXW0 634 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 OR4E2Q8NGC2 313 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 OR52E1Q8NGJ3 308 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 OR5AR1Q8NGP9 310 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 OR5K2Q8NHB8 316 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 CALML6Q8TD86 181 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 KLHL6Q8WZ60 621 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 UBXN4Q92575 508 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 PMEPA1Q969W9 287 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 CD180Q99467 661 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 FAM167BQ9BTA0 163 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 ASPSCR1Q9BZE9 553 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 SRMSQ9H3Y6 488 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 FBXO8Q9NRD0 319 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 C20orf96Q9NUD7 363 aaPredicted RBP9.46□□□□□ -0.9
SRRT-208ENST00000469602 SIDT1Q9NXL6 827 aaKnown RBP9.46□□□□□ -0.9
SRRT-208ENST00000469602 SEMA5BQ9P283 1151 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 POLG2Q9UHN1 485 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 CRYL1Q9Y2S2 319 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 B3GALT1Q9Y5Z6 326 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 FAM169AQ9Y6X4 670 aa9.46□□□□□ -0.9
SRRT-208ENST00000469602 IGHV5-51A0A0C4DH38 117 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 GSAPA4D1B5 854 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 STMND1H3BQB6 276 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 MATN2O00339 956 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 BTN3A1O00481 513 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 NDC80O14777 642 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 NIPSNAP2O75323 286 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 LIPCP11150 499 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 SHMT2P34897 504 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ELK3P41970 407 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 RPL21P46778 160 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 ARL4CP56559 192 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 MRPS25P82663 173 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 PRKAA1Q13131 559 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 CTBP1Q13363 440 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 COL28A1Q2UY09 1125 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 HSP90AA5PQ58FG0 334 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 SPANXN3Q5MJ09 141 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 BROXQ5VW32 411 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ANKS6Q68DC2 871 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 UNC5DQ6UXZ4 953 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 CEACAM20Q6UY09 585 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 KCNMB4Q86W47 210 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 AMIGO1Q86WK6 493 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ZFAND4Q86XD8 727 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 KMT5CQ86Y97 462 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 IGDCC3Q8IVU1 814 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 DENND6AQ8IWF6 608 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 TBC1D21Q8IYX1 336 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 UNC5BQ8IZJ1 945 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 CARFQ8N187 725 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 LRRC39Q96DD0 335 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 SLC41A2Q96JW4 573 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 PWWP2AQ96N64 755 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 TEFMQ96QE5 360 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 NRTNQ99748 197 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 MAP3K3Q99759 626 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 CTRCQ99895 268 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ZPBPQ9BS86 351 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
SRRT-208ENST00000469602 POMT2Q9UKY4 750 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 ICKQ9UPZ9 632 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 SSUH2Q9Y2M2 353 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 SNX24Q9Y343 169 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 TEX264Q9Y6I9 313 aa9.45□□□□□ -0.9
SRRT-208ENST00000469602 SPTBP11277 2137 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 CACNA1GO43497 2377 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 C2orf74A8MZ97 194 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 BTN3A3O00478 584 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 RAD51CO43502 376 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 KDM1AO60341 852 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 ZBTB11O95625 1053 aaPredicted RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 RPN2P04844 631 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 TPBGLP0DKB5 382 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 ERVK-10P10266 1014 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 PKMP14618 531 aaKnown RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 POLR2CP19387 275 aaPredicted RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 CHRM3P20309 590 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 KPNA2P52292 529 aaKnown RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 UCNP55089 124 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 TMPRSS3P57727 454 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 SH3BP2P78314 561 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 HSD11B2P80365 405 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 MPP1Q00013 466 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 CKAP4Q07065 602 aaKnown RBP9.44□□□□□ -0.9
SRRT-208ENST00000469602 FOXM1Q08050 763 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 ABRQ12979 859 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 IL11RAQ14626 422 aa9.44□□□□□ -0.9
SRRT-208ENST00000469602 HP1BP3Q5SSJ5 553 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms