RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 KLK3P07288 261 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 UMODP07911 640 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 UNGP13051 313 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 PVRP15151 417 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CCNFP41002 786 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CHRNA4P43681 627 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TSFMP43897 325 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 SPINT3P49223 89 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 LMAN1P49257 510 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF143P52747 638 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 RRADP55042 308 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TUBB4BP68371 445 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 OTUD4Q01804 1114 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ACY1Q03154 408 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 NIPAL4Q0D2K0 466 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TUBB2AQ13885 445 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF169Q14929 603 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 NCF4Q15080 339 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 INSCQ1MX18 579 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 HSP90AA4PQ58FG1 418 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 VWA2Q5GFL6 755 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 KLHDC7AQ5VTJ3 777 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 C1orf189Q5VU69 101 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 MLIPQ5VWP3 458 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ALS2CLQ60I27 953 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TRIM72Q6ZMU5 477 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 RFX8Q6ZV50 586 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF765Q7L2R6 523 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 UBE3DQ7Z6J8 389 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CD163Q86VB7 1156 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 PRIMA1Q86XR5 153 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 PHYKPLQ8IUZ5 450 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 FAM20CQ8IXL6 584 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ARMC10Q8N2F6 343 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF808Q8N4W9 903 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ADAMTS18Q8TE60 1221 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF653Q96CK0 615 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CNDP1Q96KN2 507 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 LRFN5Q96NI6 719 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 MGME1Q9BQP7 344 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 SNRNP25Q9BV90 132 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TUBB2BQ9BVA1 445 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 TRIM7Q9C029 511 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CARD9Q9H257 536 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 FAM83DQ9H4H8 585 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 SLC6A20Q9NP91 592 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 NT5MQ9NPB1 228 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 SLC22A11Q9NSA0 550 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 POT1Q9NUX5 634 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 HRASLS2Q9NWW9 162 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 KCTD5Q9NXV2 234 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 PLA2G3Q9NZ20 509 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 ACTR10Q9NZ32 417 aa5.12□□□□□ -1.59
PTPN4-209ENST00000469511 CWC15Q9P013 229 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 G3BP2Q9UN86 482 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 PTRH2Q9Y3E5 179 aaKnown RBP5.12□□□□□ -1.59
PTPN4-209ENST00000469511 SCN2AQ99250 2005 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 UBA6A0AVT1 1052 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GTPBP10A4D1E9 387 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 OR6C74A6NCV1 312 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 OR5K3A6NET4 321 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SIGLEC16A6NMB1 481 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 TMEM150CB9EJG8 249 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RGS13O14921 159 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 EPHB6O15197 1021 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GPR39O43194 453 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 ZNF749O43361 778 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SLC25A14O95258 325 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SMC2O95347 1197 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 LSM8O95777 96 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GNA14O95837 355 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PIRTP0C851 137 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SLC2A4P14672 509 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 TCF4P15884 667 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 ST6GAL1P15907 406 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 POLR2CP19387 275 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SSTR2P30874 369 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PBX1P40424 430 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RENBPP51606 427 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 CTSCP53634 463 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 IST1P53990 364 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SOX8P57073 446 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GSDMDP57764 484 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 BPIFB4P59827 614 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 CSNK1G2P78368 415 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 HSD11B2P80365 405 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 STIM1Q13586 685 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GALNT3Q14435 633 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RFTN1Q14699 578 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SSPNQ14714 243 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PRKD1Q15139 912 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 RPE65Q16518 533 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 C3AR1Q16581 482 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PPP6R3Q5H9R7 873 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 DNTTIP2Q5QJE6 756 aaKnown RBP5.11□□□□□ -1.59
PTPN4-209ENST00000469511 PRAMEF13Q5VWM6 474 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 IGFL2Q6UWQ7 119 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 SEZ6L2Q6UXD5 910 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 GFRALQ6UXV0 394 aa5.11□□□□□ -1.59
PTPN4-209ENST00000469511 LINC00696Q6ZRV3 163 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms