RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ATP5F1P24539 256 aaPredicted RBP17.08■□□□□ 0.33
RPL39-202ENST00000468844 RPIAP49247 311 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 ILF3Q12906 894 aaKnown RBP eCLIP17.08■□□□□ 0.33
RPL39-202ENST00000468844 MBOAT1Q6ZNC8 495 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 PRR23BQ6ZRT6 265 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 ZCCHC23Q6ZST2 131 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 PIGKQ92643 395 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 PHF21BQ96EK2 531 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 FOPNLQ96NB1 174 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 RDH14Q9HBH5 336 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 SUSD2Q9UGT4 822 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 OTOGLQ3ZCN5 2332 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 PRR5-ARHGAP8B1AHC4 643 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 SLC16A5O15375 505 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 KLK8O60259 260 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 SNX2O60749 519 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 IPO13O94829 963 aaKnown RBP17.08■□□□□ 0.32
RPL39-202ENST00000468844 GUCA1CO95843 209 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 ENO2P09104 434 aaPredicted RBP17.08■□□□□ 0.32
RPL39-202ENST00000468844 TPBGLP0DKB5 382 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 FGF3P11487 239 aaPredicted RBP17.08■□□□□ 0.32
RPL39-202ENST00000468844 TAC1P20366 129 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 BGNP21810 368 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 MAPK9P45984 424 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 BDKRB1P46663 353 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 C21orf59P57076 290 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 NFKB2Q00653 900 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 CLCA4Q14CN2 919 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 PFKFB4Q16877 469 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 UAP1L1Q3KQV9 507 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 CCSMST1Q4G0I0 132 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 PRRT3Q5FWE3 981 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 CES4AQ5XG92 561 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.32
RPL39-202ENST00000468844 SYT12Q8IV01 421 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.32
RPL39-202ENST00000468844 SKA1Q96BD8 255 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 MOCOSQ96EN8 888 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 MAGEB18Q96M61 343 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
RPL39-202ENST00000468844 PDZK1P1A8MUH7 402 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 IFRD1O00458 451 aaPredicted RBP17.07■□□□□ 0.32
RPL39-202ENST00000468844 SMIM24O75264 130 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 C1orf105O95561 183 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 GFAPP14136 432 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 CYP2A7P20853 494 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 NUBP1P53384 320 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 BNC1Q01954 994 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 TEAD4Q15561 434 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 KIF19Q2TAC6 998 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 FBXO48Q5FWF7 155 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 LIPMQ5VYY2 423 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 PDPRQ8NCN5 879 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 TMEM237Q96Q45 408 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
RPL39-202ENST00000468844 NUDT4Q9NZJ9 180 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 NCKIPSDQ9NZQ3 722 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 SCHIP1Q9P0W5 487 aaPredicted RBP17.07■□□□□ 0.32
RPL39-202ENST00000468844 PCOLCE2Q9UKZ9 415 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 ASF1AQ9Y294 204 aa17.07■□□□□ 0.32
RPL39-202ENST00000468844 RP1P56715 2156 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 A6NCN8 305 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 OR52A4PA6NMU1 304 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 TRIM13O60858 407 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 CTSEP14091 401 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CTSKP43235 329 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 C1orf61Q13536 156 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CHI3L2Q15782 390 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 LPAL2Q16609 132 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 DUS1LQ6P1R4 473 aaKnown RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 UNC5DQ6UXZ4 953 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 FBXO39Q8N4B4 442 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 PTGR2Q8N8N7 351 aaPredicted RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 OR5AR1Q8NGP9 310 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 OR6Y1Q8NGX8 325 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 GSDMCQ9BYG8 508 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CCDC134Q9H6E4 229 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 ACSS2Q9NR19 701 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 ARL15Q9NXU5 204 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CD274Q9NZQ7 290 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CIDEBQ9UHD4 219 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 SIX3O95343 332 aaPredicted RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 HIST1H2AGP0C0S8 130 aaPredicted RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 HIST1H2ADP20671 130 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 PRKAA2P54646 552 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 ABRAXAS1Q6UWZ7 409 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 SLC22A9Q8IVM8 553 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 FBXO15Q8NCQ5 510 aaPredicted RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 MCOLN3Q8TDD5 553 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 ZNF75CPQ92670 426 aaPredicted RBP17.06■□□□□ 0.32
RPL39-202ENST00000468844 RHBDF1Q96CC6 855 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 CCDC126Q96EE4 140 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 HIST1H2AHQ96KK5 128 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 C12orf66Q96MD2 445 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 HIST1H2AJQ99878 128 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms