RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TFB2MQ9H5Q4 396 aaKnown RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 MVB12BQ9H7P6 319 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 NLE1Q9NVX2 485 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 ACTR10Q9NZ32 417 aa20.42■□□□□ 0.86
COL9A3-207ENST00000467819 REXO2Q9Y3B8 237 aaKnown RBP20.42■□□□□ 0.86
COL9A3-207ENST00000467819 ESPL1Q14674 2120 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 CCDC78A2IDD5 438 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 BLACEA4D250 179 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 GRID2IPA4D2P6 1211 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 C2orf74A8MZ97 194 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 H7C0S8 307 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 VPS4BO75351 444 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 TMEM63AO94886 807 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 METTL18O95568 372 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 CAPN1P07384 714 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 CD151P48509 253 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 ITGA1P56199 1179 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 RPA4Q13156 261 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 BOP1Q14137 746 aaKnown RBP20.41■□□□□ 0.86
COL9A3-207ENST00000467819 DBN1Q16643 649 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 PARP6Q2NL67 630 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 ADGRF3Q8IZF5 1079 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 TAB3Q8N5C8 712 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-207ENST00000467819 CPT1CQ8TCG5 803 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 PANX2Q96RD6 677 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 LACRTQ9GZZ8 138 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 LRRC40Q9H9A6 602 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 MLXIPLQ9NP71 852 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 SMARCAL1Q9NZC9 954 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 SERTAD3Q9UJW9 196 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 VPS4AQ9UN37 437 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 PCSK5Q92824 1860 aa20.41■□□□□ 0.86
COL9A3-207ENST00000467819 NBPF19A0A087WUL8 3843 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 E7EQ34 232 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 ZNF189O75820 626 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-207ENST00000467819 MSL3P1P0C860 447 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 GNLYP22749 145 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 CACNG1Q06432 222 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 BRD3Q15059 726 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 CDHR3Q6ZTQ4 885 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 TRIM73Q86UV7 250 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 HOOK3Q86VS8 718 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 TMTC1Q8IUR5 882 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 LRRC57Q8N9N7 239 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 ACRBPQ8NEB7 543 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 OR5AR1Q8NGP9 310 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 STYXQ8WUJ0 223 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 CDKN2AIPNLQ96HQ2 116 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 ICKQ9UPZ9 632 aa20.4■□□□□ 0.86
COL9A3-207ENST00000467819 GOLGA6L9A6NEM1 432 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 A6NL46 340 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 BTNL10A8MVZ5 291 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ZNF185O15231 689 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ZNF749O43361 778 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ATXN8OSP0DMR3 200 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 VAV2P52735 878 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 NCF4Q15080 339 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 SPESP1Q6UW49 350 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 RAD9BQ6WBX8 426 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 FDCSPQ8NFU4 85 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 N4BP2L2Q92802 583 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ALS2CR12Q96Q35 445 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 LUZP4Q9P127 313 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 PACSIN2Q9UNF0 486 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ZNF451Q9Y4E5 1061 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 PRSS21Q9Y6M0 314 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 ANKRD12Q6UB98 2062 aa20.39■□□□□ 0.85
COL9A3-207ENST00000467819 OR51F1A6NGY5 319 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 C9J4A7 227 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 AP2A2O94973 939 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 GSTM1P09488 218 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 GDF10P55107 478 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 GSTM4Q03013 218 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 ATP1A4Q13733 1029 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 DEFB110Q30KQ9 67 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 PAPD7Q5XG87 772 aaKnown RBP20.38■□□□□ 0.85
COL9A3-207ENST00000467819 NAPRTQ6XQN6 538 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 GPR135Q8IZ08 494 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 ZBTB2Q8N680 514 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 C19orf47Q8N9M1 422 aaKnown RBP20.38■□□□□ 0.85
COL9A3-207ENST00000467819 TTC13Q8NBP0 860 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 GALNT11Q8NCW6 608 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 ELMO1Q92556 727 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 NUDT9Q9BW91 350 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 MFRPQ9BY79 579 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 FAM60AQ9NP50 221 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 AMFRQ9UKV5 643 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 G3BP2Q9UN86 482 aaKnown RBP20.38■□□□□ 0.85
COL9A3-207ENST00000467819 ASF1AQ9Y294 204 aa20.38■□□□□ 0.85
COL9A3-207ENST00000467819 R3HDM2Q9Y2K5 976 aaKnown RBP20.38■□□□□ 0.85
COL9A3-207ENST00000467819 TDRKHQ9Y2W6 561 aaKnown RBP20.38■□□□□ 0.85
COL9A3-207ENST00000467819 LIN7AO14910 233 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-207ENST00000467819 CEACAM4O75871 244 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 UGT2B7P16662 529 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 AGXTP21549 392 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 MSNP26038 577 aaKnown RBP20.37■□□□□ 0.85
COL9A3-207ENST00000467819 ZNF75DP51815 510 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 P3H1Q32P28 736 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 CCDC38Q502W7 563 aa20.37■□□□□ 0.85
COL9A3-207ENST00000467819 UNC5AQ6ZN44 842 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms