RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CLDND1Q9NY35 253 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 SUCOQ9UBS9 1254 aaKnown RBP13.54□□□□□ -0.24
BRAT1-203ENST00000467558 DHRS7Q9Y394 339 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 U3KQV3 271 aa13.54□□□□□ -0.24
BRAT1-203ENST00000467558 MAGEB17A8MXT2 336 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 MTHFRP42898 656 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 HMGCS1Q01581 520 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 NFATC2Q13469 925 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 Q6ZVL8 140 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 TAF8Q7Z7C8 310 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 KIAA2013Q8IYS2 634 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ADAMTS15Q8TE58 950 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 KLK6Q92876 244 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 FRG2BQ96QU4 278 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 LRRC3Q9BY71 257 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 GULP1Q9UBP9 304 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ATP6V1HQ9UI12 483 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 KRT8P05787 483 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SLC35G6P0C7Q6 338 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 CTSAP10619 480 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 LRRTM4Q86VH4 590 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 TXNDC5Q8NBS9 432 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 KCNN1Q92952 543 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SIPA1Q96FS4 1042 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 NDRG2Q9UN36 371 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 HEBP2Q9Y5Z4 205 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 POP7O75817 140 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 S1PR4O95977 384 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 AKT2P31751 481 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 GKP32189 559 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 UGT2B15P54855 530 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 DGCR6Q14129 220 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 GCNT6Q5T4J0 391 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 DPY19L3Q6ZPD9 716 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 LINC01465Q8N7H1 131 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 RHEBL1Q8TAI7 183 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 MPP4Q96JB8 637 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 NSUN3Q9H649 340 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 DDX18Q9NVP1 670 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 DZANK1Q9NVP4 752 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ELOVL2Q9NXB9 296 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SEC14L3Q9UDX4 400 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SLC22A14Q9Y267 594 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 TIE1P35590 1138 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 UBE3AQ05086 875 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF678Q5SXM1 525 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 KLHDC10Q6PID8 442 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 EXOSC8Q96B26 276 aaKnown RBP13.53□□□□□ -0.24
BRAT1-203ENST00000467558 BTBD9Q96Q07 612 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 RAB26Q9ULW5 256 aa13.53□□□□□ -0.24
BRAT1-203ENST00000467558 FAM189A1O60320 539 aa13.52□□□□□ -0.24
BRAT1-203ENST00000467558 MAGEA6P43360 314 aa13.52□□□□□ -0.24
BRAT1-203ENST00000467558 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.24
BRAT1-203ENST00000467558 SLC2A11Q9BYW1 496 aa13.52□□□□□ -0.24
BRAT1-203ENST00000467558 MTMR10Q9NXD2 777 aa13.52□□□□□ -0.24
BRAT1-203ENST00000467558 C21orf59P57076 290 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 TEAD4Q15561 434 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 PARGQ86W56 976 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF540Q8NDQ6 660 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 OR4F6Q8NGB9 312 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 OR52L1Q8NGH7 329 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 CLIP3Q96DZ5 547 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 TGM5O43548 720 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 AP2A2O94973 939 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 GSRP00390 522 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 TIMP1P01033 207 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 CCNYL3P0C7X3 344 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 ACP5P13686 325 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 HNF1BP35680 557 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 BMPR1AP36894 532 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 PCYT1AP49585 367 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 STXBP1P61764 594 aaKnown RBP13.52□□□□□ -0.25
BRAT1-203ENST00000467558 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 DEF8Q6ZN54 512 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 HID1Q8IV36 788 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 GPR135Q8IZ08 494 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 TRPV1Q8NER1 839 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms