RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	GULP1	Q9UBP9	304 aa		12.02	□□□□□ -0.49
HDLBP-231	ENST00000467435	POLG2	Q9UHN1	485 aa		12.02	□□□□□ -0.49
HDLBP-231	ENST00000467435	PTGDR2	Q9Y5Y4	395 aa		12.02	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3D	A0A087WVF3	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3I	A0A087WXS9	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3E	A0A087X179	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3K	A0A087X1G2	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	C17orf113	A0A1B0GUU1	675 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	ATP6AP2	A0A1C7CYW4	349 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	KRT87P	A6NCN2	255 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MGAT4D	A6NG13	374 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MEI4	A8MW99	385 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3L	B9A6J9	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CHUK	O15111	745 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	STK16	O75716	305 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	ATP6AP2	O75787	350 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	POP7	O75817	140 aa	Known RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	WDR47	O94967	919 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	PAK4	O96013	591 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CAPN1	P07384	714 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	KRT16	P08779	473 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3H	P0C7X1	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	C7	P10643	843 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MYCLP1	P12525	358 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	IL9	P15248	144 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	EPB42	P16452	691 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CD72	P21854	359 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	PDHA2	P29803	388 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	ADSL	P30566	484 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MAT2A	P31153	395 aa	Known RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	GGT5	P36269	586 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SLC6A12	P48065	614 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CCR3	P51677	355 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MXRA7	P84157	204 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SQLE	Q14534	574 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	INPP5A	Q14642	412 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MAP7D1	Q3KQU3	841 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3G	Q6DHY5	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3C	Q6IPX1	549 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TTC23L	Q6PF05	361 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	XKR5	Q6UX68	686 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CHSY3	Q70JA7	882 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	LRRTM4	Q86VH4	590 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SNX31	Q8N9S9	440 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	FOXJ1	Q92949	421 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	FBXL8	Q96CD0	374 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	CMTM5	Q96DZ9	223 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MIPEP	Q99797	713 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	BTBD10	Q9BSF8	475 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	LGR4	Q9BXB1	951 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SLC17A9	Q9BYT1	436 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SLC32A1	Q9H598	525 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	SLC40A1	Q9NP59	571 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	PFDN4	Q9NQP4	134 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	MRGBP	Q9NV56	204 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	PRDM4	Q9UKN5	801 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	DUSP12	Q9UNI6	340 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	OR1A2	Q9Y585	309 aa		12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435	COPG1	Q9Y678	874 aa	Known RBP	12.01	□□□□□ -0.49
HDLBP-231	ENST00000467435		B2RBV5	119 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	GPR89A	B7ZAQ6	455 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	MAN2B1	O00754	1011 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	UBD	O15205	165 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	GYG2	O15488	501 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	VPS4B	O75351	444 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	KATNA1	O75449	491 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	LINC00032	P0C843	101 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	GPR89B	P0CG08	455 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	COX4I1	P13073	169 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	HGF	P14210	728 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	EZR	P15311	586 aa	Known RBP	12	□□□□□ -0.49
HDLBP-231	ENST00000467435	GABRG2	P18507	467 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	HMOX2	P30519	316 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	PLOD1	Q02809	727 aa	Predicted RBP	12	□□□□□ -0.49
HDLBP-231	ENST00000467435	NFE2L1	Q14494	772 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	XKR7	Q5GH72	579 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	TCHHL1	Q5QJ38	904 aa	Predicted RBP	12	□□□□□ -0.49
HDLBP-231	ENST00000467435	NEK5	Q6P3R8	708 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12	□□□□□ -0.49
HDLBP-231	ENST00000467435		Q6ZS52	159 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12	□□□□□ -0.49
HDLBP-231	ENST00000467435	MILR1	Q7Z6M3	343 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	C11orf96	Q7Z7L8	435 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	LONP2	Q86WA8	852 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	CHCHD4	Q8N4Q1	142 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	OXR1	Q8N573	874 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	METTL6	Q8TCB7	284 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	TUBGCP3	Q96CW5	907 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	GUCD1	Q96NT3	240 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	MYOC	Q99972	504 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	TBC1D10A	Q9BXI6	508 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	DPEP2	Q9H4A9	486 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	AKTIP	Q9H8T0	292 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	FZD3	Q9NPG1	666 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	CD93	Q9NPY3	652 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	DNAJC11	Q9NVH1	559 aa		12	□□□□□ -0.49
HDLBP-231	ENST00000467435	TRPS1	Q9UHF7	1281 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms