RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 CLCNKAP51800 687 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GFRA1P56159 465 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 BCL2L1Q07817 233 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 MYBPHQ13203 477 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 MFAP5Q13361 173 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GTF2H3Q13889 308 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 PLCL1Q15111 1095 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 SEPT7Q16181 437 aaKnown RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 CYP2A13Q16696 494 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GRAMD1BQ3KR37 738 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 PTPN20Q4JDL3 420 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 EXOSC6Q5RKV6 272 aaKnown RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 ZNF648Q5T619 568 aaPredicted RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 GTF2IRD2BQ6EKJ0 949 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 MYO7BQ6PIF6 2116 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 ISLR2Q6UXK2 745 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 Q6ZPB1 254 aaPredicted RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 CHSY3Q70JA7 882 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 FGD2Q7Z6J4 655 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GTF2IRD2Q86UP8 949 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 DOLPP1Q86YN1 238 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 TRIM48Q8IWZ4 208 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 ARHGEF39Q8N4T4 335 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 LINC00301Q8NCQ3 95 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 OR2Y1Q8NGV0 311 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 LILRB4Q8NHJ6 448 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 EXD1Q8NHP7 514 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 SLC35C1Q96A29 364 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 PTERQ96BW5 349 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 AP2M1Q96CW1 435 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 THOC3Q96J01 351 aaKnown RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 CFAP57Q96MR6 1250 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 DMRTA2Q96SC8 542 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 ZFYVE21Q9BQ24 234 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 DPH2Q9BQC3 489 aaPredicted RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 MESP1Q9BRJ9 268 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 RIOK2Q9BVS4 552 aaKnown RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 TLR10Q9BXR5 811 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 LHPPQ9H008 270 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 RETREG1Q9H6L5 497 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 EPS8L2Q9H6S3 715 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GP6Q9HCN6 339 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 SLC6A20Q9NP91 592 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 KLC4Q9NSK0 619 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 GPATCH2LQ9NWQ4 482 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 KCTD5Q9NXV2 234 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 PRR13Q9NZ81 148 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 VPS18Q9P253 973 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 UBA2Q9UBT2 640 aaPredicted RBP4.11□□□□□ -1.75
CPS1-205ENST00000467353 SMC3Q9UQE7 1217 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 PADI2Q9Y2J8 665 aa4.11□□□□□ -1.75
CPS1-205ENST00000467353 TRAV17A0A0B4J275 112 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CCDC66A2RUB6 948 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 SLC9B1P1A6NJY1 282 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PDZK1P1A8MUH7 402 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 TMEM150CB9EJG8 249 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PSMD11O00231 422 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CETN3O15182 167 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ZNF749O43361 778 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 HTRA2O43464 458 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 NUAK1O60285 661 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PRAMEF11O60813 436 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CRLF1O75462 422 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RASAL1O95294 804 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 SIX3O95343 332 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 ZBTB11O95625 1053 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 CRTAMO95727 393 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CRYABP02511 175 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 TPOP07202 933 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PF4V1P10720 104 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 EPB41P11171 864 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 ZNF8P17098 575 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 CTPS1P17812 591 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CYP2A7P20853 494 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 AGXTP21549 392 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RPL10P27635 214 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 CD68P34810 354 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 ECI1P42126 302 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 FMO5P49326 533 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 DRG2P55039 364 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 DLX5P56178 289 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 SESN3P58005 492 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 YBEYP58557 167 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 ARG2P78540 354 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PPP2R2BQ00005 443 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PMP22Q01453 160 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 POU4F1Q01851 419 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 GCNT1Q02742 428 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ADCY2Q08462 1091 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 NSUN2Q08J23 767 aaKnown RBP eCLIP4.1□□□□□ -1.75
CPS1-205ENST00000467353 SLC9A5Q14940 896 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 INAQ16352 499 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 DEFB113Q30KQ7 82 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 DNTTIP2Q5QJE6 756 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 TMTC4Q5T4D3 741 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 AGAP9Q5VTM2 703 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 C1orf189Q5VU69 101 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 KIRREL2Q6UWL6 708 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ABRAXAS1Q6UWZ7 409 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 TRIM72Q6ZMU5 477 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms