RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SIDT2Q8NBJ9 832 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 TTLQ8NG68 377 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 KAT2AQ92830 837 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC22A18Q96BI1 424 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ACBD6Q9BR61 282 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 MECRQ9BV79 373 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 DPEP3Q9H4B8 488 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ABCB9Q9NP78 766 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ABCB8Q9NUT2 735 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
HPS4-209ENST00000466781 TULP3O75386 442 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GOT2P00505 430 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 NCBP2P52298 156 aaKnown RBP eCLIP8.57□□□□□ -1.046e-6■■□□□ 11.7
HPS4-209ENST00000466781 CHAF1BQ13112 559 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 PRSS55Q6UWB4 352 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 HM13Q8TCT9 377 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ACOT12Q8WYK0 555 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CEP295NLQ96MC4 621 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SAMD11Q96NU1 681 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 IFT27Q9BW83 186 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 B3GNT5Q9BYG0 378 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 TCF7L1Q9HCS4 588 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 IFT80Q9P2H3 777 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 TCRBV9S1A1TA0A576 114 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 B4GALT4O60513 344 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 NME6O75414 186 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 S100A6P06703 90 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 IL7RP16871 459 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CXCR1P25024 350 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GDI1P31150 447 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ADRA1BP35368 520 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 FOLH1Q04609 750 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 NFATC2Q13469 925 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ZACNQ401N2 412 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 VARS2Q5ST30 1063 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 SMARCD3Q6STE5 483 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ARHGAP22Q7Z5H3 698 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 RALGPS2Q86X27 583 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 ZNF615Q8N8J6 731 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 PNLDC1Q8NA58 520 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 JOSD2Q8TAC2 188 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 RELTQ969Z4 430 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC25A36Q96CQ1 311 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC39A3Q9BRY0 314 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 NDC1Q9BTX1 674 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 WDR26Q9H7D7 661 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 CORO1CQ9ULV4 474 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 TCAF1Q9Y4C2 921 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 FKBP7Q9Y680 259 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 FAM172BPA6NC97 362 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 A8MUA0 341 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 OR1I1O60431 355 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 TSPAN9O75954 239 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 RPS9P46781 194 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 SLC6A9P48067 706 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ARF3P61204 181 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 ELF3P78545 371 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 ARF1P84077 181 aaKnown RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 NOMO1Q15155 1222 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 REP15Q6BDI9 236 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 LCLAT1Q6UWP7 414 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 GKN2Q86XP6 184 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ZSCAN4Q8NAM6 433 aaPredicted RBP8.57□□□□□ -1.04
HPS4-209ENST00000466781 C11orf65Q8NCR3 313 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 LRRN4CLQ8ND94 238 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 LPIN3Q9BQK8 851 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 ACSS3Q9H6R3 686 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 SDHAF3Q9NRP4 125 aa8.57□□□□□ -1.04
HPS4-209ENST00000466781 A0A0J9YVX5 310 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 RGS10O43665 173 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PRAMEF12O95522 483 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 GSTT2BP0CG30 244 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 CDKL1Q00532 357 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 AUHQ13825 339 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 TAF1AQ15573 450 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 CARD16Q5EG05 197 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 AMZ2Q86W34 360 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 SPPL2CQ8IUH8 684 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 OR7D4Q8NG98 312 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CARS2Q9HA77 564 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 SMURF1Q9HCE7 757 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TXNRD2Q9NNW7 524 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 DKKL1Q9UK85 242 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 FBXO9Q9UK97 447 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGB7Q9Y5F8 929 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 H3BUI4 141 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TRAPPC6AO75865 159 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 SEMA3DO95025 777 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CD2P06729 351 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CSTF2P33240 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
HPS4-209ENST00000466781 CCR8P51685 355 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 SLC1A5Q15758 541 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 AAK1Q2M2I8 961 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TOR1AIP1Q5JTV8 583 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ADNP2Q6IQ32 1131 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZYG11AQ6WRX3 759 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 SH3RF1Q7Z6J0 888 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms