RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CYP2A13Q16696 494 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ZSWIM7Q19AV6 140 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 GPAT3Q53EU6 434 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 USP39Q53GS9 565 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 RNASE12Q5GAN4 147 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 PIGGQ5H8A4 983 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DENND5AQ6IQ26 1287 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ZNF534Q76KX8 674 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 RAVER1Q8IY67 606 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 CFAP206Q8IYR0 622 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ASZ1Q8WWH4 475 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 MYDGFQ969H8 173 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 RTP4Q96DX8 246 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 TOR3AQ9H497 397 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DNAAF2Q9NVR5 837 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 KLHL28Q9NXS3 571 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ZNF624Q9P2J8 865 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 TRAV19A0A0A6YYK7 116 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 H3BM21 787 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 LDB2O43679 373 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CDKN1CP49918 316 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 NFKB2Q00653 900 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DNASE1L3Q13609 305 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 C18orf21Q32NC0 220 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 TNFAIP8L2Q6P589 184 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 R3HCC1LQ7Z5L2 792 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 EXOSC8Q96B26 276 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 ZCCHC2Q9C0B9 1178 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 ADAMTS10Q9H324 1103 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SYNDIG1Q9H7V2 258 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ASAH2Q9NR71 780 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 MKS1Q9NXB0 559 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 N4BP2Q86UW6 1770 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 SNTNA6NMZ2 147 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 K7EPI3 171 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SLC22A2O15244 555 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 B4GAT1O43505 415 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 STATHP02808 62 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 PGRP06401 933 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 HTR6P50406 440 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KRR1Q13601 381 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 NPTX1Q15818 432 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 TIMM50Q3ZCQ8 353 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 C3orf58Q8NDZ4 430 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 HM13Q8TCT9 377 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 RELTQ969Z4 430 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DEFB118Q96PH6 123 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KCNC2Q96PR1 638 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 COPS4Q9BT78 406 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 DNAJB9Q9UBS3 223 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 PHLPP1O60346 1717 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 MAGEB17A8MXT2 336 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ZBTB42B2RXF5 422 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 NME4O00746 187 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SLC28A2O43868 658 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ALDH1A2O94788 518 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 GJB5O95377 273 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 S1PR4O95977 384 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 GNAO1P09471 354 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CLTBP09497 229 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CAPN3P20807 821 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 PURAQ00577 322 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 PTSQ03393 145 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KCNAB2Q13303 367 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 OR4D1Q15615 310 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 HKDC1Q2TB90 917 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 COLEC12Q5KU26 742 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 PSAPL1Q6NUJ1 521 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 TRIM40Q6P9F5 258 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KRTCAP2Q8N6L1 136 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KBTBD8Q8NFY9 601 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 ATL1Q8WXF7 558 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SUSD3Q96L08 255 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 SLC2A13Q96QE2 648 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 KCNS3Q9BQ31 491 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 FAM83DQ9H4H8 585 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 WDR6Q9NNW5 1121 aaKnown RBP8.91□□□□□ -0.98
HPS4-208ENST00000464362 ABCB8Q9NUT2 735 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 MALT1Q9UDY8 824 aa8.91□□□□□ -0.98
HPS4-208ENST00000464362 CLIC1O00299 241 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 PER2O15055 1255 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 FAM189A1O60320 539 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 TULP3O75386 442 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 SCELO95171 688 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 CD36P16671 472 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 IGFBP6P24592 240 aaPredicted RBP8.9□□□□□ -0.98
HPS4-208ENST00000464362 PRDX3P30048 256 aaKnown RBP8.9□□□□□ -0.98
HPS4-208ENST00000464362 TRIM32Q13049 653 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 PIK3R6Q5UE93 754 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 SMYD1Q8NB12 490 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 RAB2BQ8WUD1 216 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 ING5Q8WYH8 240 aa8.9□□□□□ -0.98
HPS4-208ENST00000464362 KIAA1191Q96A73 305 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms