RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
XRN1-203ENST00000463916 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 NDUFS3O75489 264 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 DLGAP3O95886 979 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 FGF5P12034 268 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 PRDX3P30048 256 aaKnown RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 IL11RAQ14626 422 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 PTRHD1Q6GMV3 140 aaKnown RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 OTUD6BQ8N6M0 293 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 OR5K2Q8NHB8 316 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 ASZ1Q8WWH4 475 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 LPGAT1Q92604 370 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 TTC9Q92623 222 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 SLCO2A1Q92959 643 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 UBL7Q96S82 380 aaPredicted RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 NAPGQ99747 312 aaPredicted RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 ULBP3Q9BZM4 244 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 CIDEBQ9UHD4 219 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 PLAGL1Q9UM63 463 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 CRYL1Q9Y2S2 319 aa12.58□□□□□ -0.39
XRN1-203ENST00000463916 TDRKHQ9Y2W6 561 aaKnown RBP12.58□□□□□ -0.39
XRN1-203ENST00000463916 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 FAM237BA0A1B0GVD1 139 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 GSAPA4D1B5 854 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 SLC9B1P1A6NJY1 282 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 SLCO2B1O94956 709 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 PRB1P04280 392 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 FMO4P31512 558 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 HSD11B2P80365 405 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 ABRQ12979 859 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 TUBB3Q13509 450 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 DHX34Q14147 1143 aaKnown RBP12.58□□□□□ -0.4
XRN1-203ENST00000463916 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 TBC1D21Q8IYX1 336 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 NLGN4XQ8N0W4 816 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 D2HGDHQ8N465 521 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 LMNTD1Q8N9Z9 388 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 SIDT2Q8NBJ9 832 aaKnown RBP12.58□□□□□ -0.4
XRN1-203ENST00000463916 NLGN4YQ8NFZ3 816 aaPredicted RBP12.58□□□□□ -0.4
XRN1-203ENST00000463916 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
XRN1-203ENST00000463916 FAM136AQ96C01 138 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 TRIT1Q9H3H1 467 aaKnown RBP12.58□□□□□ -0.4
XRN1-203ENST00000463916 SPHK1Q9NYA1 384 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 SAMD15Q9P1V8 674 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
XRN1-203ENST00000463916 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 BANF1O75531 89 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 SPAG6O75602 509 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 ZBTB11O95625 1053 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 PVRP15151 417 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 RPS3P23396 243 aaKnown RBP eCLIP12.57□□□□□ -0.4
XRN1-203ENST00000463916 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 PRKAA1Q13131 559 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 PTK6Q13882 451 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 GPR19Q15760 415 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 DENND6AQ8IWF6 608 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 CFAP61Q8NHU2 1237 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 MENTQ9BUN1 341 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 AKIRIN1Q9H9L7 192 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 ASIC3Q9UHC3 531 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 GNPTGQ9UJJ9 305 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 BSNQ9UPA5 3926 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 CTAGE9A4FU28 777 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 DNALI1O14645 258 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 ATXN7O15265 892 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 S1PR4O95977 384 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 CDH3P22223 829 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 F8A1P23610 371 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 MAP4P27816 1152 aaKnown RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 CTBP1Q13363 440 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 GRB7Q14451 532 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 KMT5CQ86Y97 462 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 GALNT6Q8NCL4 622 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 FLVCR1-AS1Q8TAF5 88 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 PITPNM3Q9BZ71 974 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 TWSG1Q9GZX9 223 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 C1GALT1Q9NS00 363 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 ACTR10Q9NZ32 417 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms