RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SDC4P31431 198 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CTNNA1P35221 906 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ACTN2P35609 894 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PIK3CGP48736 1102 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CXCR3P49682 368 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 UCNP55089 124 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NAP1L1P55209 391 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC8A3P57103 927 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MRPS25P82663 173 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TAP2Q03519 686 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 DEUP1Q05D60 604 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 KDSRQ06136 332 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SHBQ15464 509 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SIX1Q15475 284 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC25A52Q3SY17 297 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FUT11Q495W5 492 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ALFQ53S48 1182 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FAM133BQ5BKY9 247 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 EFHC1Q5JVL4 640 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RBM20Q5T481 1227 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MANEALQ5VSG8 457 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SCYL2Q6P3W7 929 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RFWD3Q6PCD5 774 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MFSD7Q6UXD7 560 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NPNTQ6UXI9 565 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PRUNE1Q86TP1 453 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PPP1R3BQ86XI6 285 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FAM90A1Q86YD7 464 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PDSS2Q86YH6 399 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ZDHHC17Q8IUH5 632 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 BBS7Q8IWZ6 715 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SRRM1Q8IYB3 904 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CHPFQ8IZ52 775 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NPWQ8N729 165 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PQLC3Q8N755 202 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 WFDC5Q8TCV5 224 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HSPH1Q92598 858 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 DPF1Q92782 380 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RFKQ969G6 155 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SARAFQ96BY9 339 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PRMT1Q99873 361 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CNPY3Q9BT09 278 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC13A1Q9BZW2 595 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TKTL2Q9H0I9 626 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FBXO44Q9H4M3 255 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FAM204AQ9H8W3 233 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TLR8Q9NR97 1041 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ABCC13Q9NSE7 274 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SIDT1Q9NXL6 827 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RNF7Q9UBF6 113 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 IP6K2Q9UHH9 426 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 FZD10Q9ULW2 581 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 R3HDM2Q9Y2K5 976 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RAD54BQ9Y620 910 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 STON1Q9Y6Q2 735 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SCINQ9Y6U3 715 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NUP210Q8TEM1 1887 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SHROOM3Q8TF72 1996 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 DNAJC9-AS1A6NH13 148 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MEI4A8MW99 385 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 M0QYG6 137 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NPC1O15118 1278 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 VILLO15195 856 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SPOPO43791 374 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC28A2O43868 658 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TSPAN3O60637 253 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PROP1O75360 226 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 LDOC1O95751 146 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 EBLN1P0CF75 366 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MBL2P11226 248 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PECAM1P16284 738 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 GOT1P17174 413 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CTNNA2P26232 953 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CD27P26842 260 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CORO1AP31146 461 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MAN1A1P33908 653 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HNF1BP35680 557 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SSR1P43307 286 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ACADVLP49748 655 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CCT8P50990 548 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MAP2K6P52564 334 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 CLDN6P56747 220 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TBX4P57082 545 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 NXPH1P58417 271 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 SLC10A2Q12908 348 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 DPYSL3Q14195 570 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 LY6DQ14210 128 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 TBCCQ15814 346 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 MS4A13Q5J8X5 152 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HECTD3Q5T447 861 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 HES3Q5TGS1 186 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PAPD7Q5XG87 772 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RAP1GAP2Q684P5 730 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 KIAA1324Q6UXG2 1013 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 RSRC2Q7L4I2 434 aaKnown RBP3.64□□□□□ -1.83
SCFD1-204ENST00000463622 BEND5Q7L4P6 421 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 ARCQ7LC44 396 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 STRADAQ7RTN6 431 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 PEX26Q7Z412 305 aa3.64□□□□□ -1.83
SCFD1-204ENST00000463622 GLCCI1Q86VQ1 547 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms