RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 ILKAPQ9H0C8 392 aaPredicted RBP15.18■□□□□ 0.02
SND1-203ENST00000463020 TRABDQ9H4I3 376 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 FAM96AQ9H5X1 160 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 FANCEQ9HB96 536 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 C5AR2Q9P296 337 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 SRPK3Q9UPE1 567 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 SEC16AO15027 2179 aa15.18■□□□□ 0.02
SND1-203ENST00000463020 POLQO75417 2590 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 E7EQ34 232 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 CCL22O00626 93 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 URI1O94763 535 aaPredicted RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 MSL3P1P0C860 447 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 PRSS56P0CW18 603 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 PDHA2P29803 388 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 XIAPP98170 497 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 MYBPC3Q14896 1274 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 ASTE1Q2TB18 679 aaPredicted RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 MLIPQ5VWP3 458 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 IGFL3Q6UXB1 125 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 RAD9BQ6WBX8 426 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 Q6ZS92 163 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 RAB43Q86YS6 212 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 ADGRF3Q8IZF5 1079 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 MNS1Q8NEH6 495 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 ACVR1CQ8NER5 493 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 OR4K2Q8NGD2 314 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 OR52E1Q8NGJ3 308 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 ZFPM2Q8WW38 1151 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 LCN9Q8WX39 176 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 HAUS1Q96CS2 278 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 OR52A5Q9H2C5 316 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 SRMSQ9H3Y6 488 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 P4HTMQ9NXG6 502 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 DHCR7Q9UBM7 475 aaKnown RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 ACSL5Q9ULC5 683 aa15.17■□□□□ 0.02
SND1-203ENST00000463020 PTRH2Q9Y3E5 179 aaKnown RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 COPG1Q9Y678 874 aaKnown RBP15.17■□□□□ 0.02
SND1-203ENST00000463020 ARHGAP10A1A4S6 786 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 TPBGLP0DKB5 382 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 ITGAXP20702 1163 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 CDKN2BP42772 138 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 GLRBP48167 497 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 CDKN1CP49918 316 aaPredicted RBP15.16■□□□□ 0.02
SND1-203ENST00000463020 PRKG2Q13237 762 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 ITGA9Q13797 1035 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 HIF1AQ16665 826 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 ZC3H18Q86VM9 953 aaKnown RBP15.16■□□□□ 0.02
SND1-203ENST00000463020 TTC13Q8NBP0 860 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 FLVCR1-AS1Q8TAF5 88 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 CTNNBL1Q8WYA6 563 aaPredicted RBP15.16■□□□□ 0.02
SND1-203ENST00000463020 LINC00615Q96LM1 132 aaPredicted RBP15.16■□□□□ 0.02
SND1-203ENST00000463020 GBP5Q96PP8 586 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 FCRL5Q96RD9 977 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 FERD3LQ96RJ6 166 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 SRPK1Q96SB4 655 aaKnown RBP15.16■□□□□ 0.02
SND1-203ENST00000463020 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 APOL2Q9BQE5 337 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 MESP1Q9BRJ9 268 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 SLC22A11Q9NSA0 550 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 ICKQ9UPZ9 632 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
SND1-203ENST00000463020 MDC1Q14676 2089 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 CCDC66A2RUB6 948 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 C9J4A7 227 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 STX7O15400 261 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 LRRTM2O43300 516 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 IPO7O95373 1038 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 EPOP01588 193 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 VARSP26640 1264 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 PRLHRP49683 370 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 TMPRSS15P98073 1019 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 PRKAA1Q13131 559 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 MSLNQ13421 630 aaPredicted RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 TAZQ16635 292 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 ZDHHC20Q5W0Z9 365 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 KCNMB4Q86W47 210 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 VSIG1Q86XK7 387 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 TFB1MQ8WVM0 346 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 MARVELD3Q96A59 401 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 HGH1Q9BTY7 390 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 FICDQ9BVA6 458 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 MAK16Q9BXY0 300 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 ASB8Q9H765 288 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 SPHK1Q9NYA1 384 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 ACTR10Q9NZ32 417 aa15.15■□□□□ 0.02
SND1-203ENST00000463020 KLHL8Q9P2G9 620 aaPredicted RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 G3BP2Q9UN86 482 aaKnown RBP15.15■□□□□ 0.02
SND1-203ENST00000463020 DIDO1Q9BTC0 2240 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms